Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MIR4281-201ENST00000580852 62 ntBASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRRTM4Q86VH4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
LRRTM4Q86VH4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRRTM4Q86VH4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.08■■□□□ 1.28
LRRTM4Q86VH4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
LRRTM4Q86VH4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
LRRTM4Q86VH4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRRTM4Q86VH4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRRTM4Q86VH4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.07■■□□□ 1.28
LRRTM4Q86VH4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
LRRTM4Q86VH4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRRTM4Q86VH4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.06■■□□□ 1.28
LRRTM4Q86VH4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
LRRTM4Q86VH4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.06■■□□□ 1.28
LRRTM4Q86VH4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRTM4Q86VH4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
LRRTM4Q86VH4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRTM4Q86VH4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRRTM4Q86VH4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRRTM4Q86VH4 BX664725.1-201ENST00000438252 379 ntBASIC23.05■■□□□ 1.28
LRRTM4Q86VH4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRRTM4Q86VH4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRRTM4Q86VH4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.05■■□□□ 1.28
LRRTM4Q86VH4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 Z92544.1-202ENST00000571933 1220 ntBASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM4Q86VH4 AC137630.3-201ENST00000607245 391 ntBASIC23.03■■□□□ 1.28
LRRTM4Q86VH4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.03■■□□□ 1.28
LRRTM4Q86VH4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM4Q86VH4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.03■■□□□ 1.28
LRRTM4Q86VH4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 AC239859.2-201ENST00000444165 318 ntBASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.02■■□□□ 1.28
LRRTM4Q86VH4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM4Q86VH4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
LRRTM4Q86VH4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRTM4Q86VH4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LRRTM4Q86VH4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23■■□□□ 1.27
LRRTM4Q86VH4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23■■□□□ 1.27
LRRTM4Q86VH4 KRT125P-201ENST00000546827 989 ntBASIC23■■□□□ 1.27
LRRTM4Q86VH4 MIR6089-201ENST00000616698 64 ntBASIC23■■□□□ 1.27
LRRTM4Q86VH4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23■■□□□ 1.27
LRRTM4Q86VH4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRTM4Q86VH4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23■■□□□ 1.27
LRRTM4Q86VH4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRRTM4Q86VH4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM4Q86VH4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM4Q86VH4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRTM4Q86VH4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
LRRTM4Q86VH4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
LRRTM4Q86VH4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LRRTM4Q86VH4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms