Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
DENND4AQ7Z401 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DENND4AQ7Z401 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
DENND4AQ7Z401 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DENND4AQ7Z401 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DENND4AQ7Z401 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.58■■□□□ 1.53
DENND4AQ7Z401 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.58■■□□□ 1.53
DENND4AQ7Z401 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DENND4AQ7Z401 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DENND4AQ7Z401 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
DENND4AQ7Z401 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.58■■□□□ 1.52
DENND4AQ7Z401 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
DENND4AQ7Z401 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DENND4AQ7Z401 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
DENND4AQ7Z401 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.56■■□□□ 1.52
DENND4AQ7Z401 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
DENND4AQ7Z401 AC135279.3-201ENST00000610945 1311 ntBASIC24.56■■□□□ 1.52
DENND4AQ7Z401 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.55■■□□□ 1.52
DENND4AQ7Z401 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DENND4AQ7Z401 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
DENND4AQ7Z401 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.55■■□□□ 1.52
DENND4AQ7Z401 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DENND4AQ7Z401 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DENND4AQ7Z401 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.55■■□□□ 1.52
DENND4AQ7Z401 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
DENND4AQ7Z401 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 AC142381.2-201ENST00000566120 298 ntBASIC24.53■■□□□ 1.52
DENND4AQ7Z401 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.53■■□□□ 1.52
DENND4AQ7Z401 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.52■■□□□ 1.52
DENND4AQ7Z401 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.52■■□□□ 1.52
DENND4AQ7Z401 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.52■■□□□ 1.52
DENND4AQ7Z401 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.52■■□□□ 1.52
DENND4AQ7Z401 AC104564.3-201ENST00000582367 638 ntBASIC24.52■■□□□ 1.52
DENND4AQ7Z401 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
DENND4AQ7Z401 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
DENND4AQ7Z401 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DENND4AQ7Z401 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
DENND4AQ7Z401 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
DENND4AQ7Z401 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DENND4AQ7Z401 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DENND4AQ7Z401 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.51■■□□□ 1.51
DENND4AQ7Z401 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DENND4AQ7Z401 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DENND4AQ7Z401 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DENND4AQ7Z401 PBX2P1-201ENST00000493219 1291 ntBASIC24.5■■□□□ 1.51
DENND4AQ7Z401 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
DENND4AQ7Z401 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
DENND4AQ7Z401 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DENND4AQ7Z401 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DENND4AQ7Z401 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.49■■□□□ 1.51
DENND4AQ7Z401 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.49■■□□□ 1.51
DENND4AQ7Z401 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.49■■□□□ 1.51
DENND4AQ7Z401 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
DENND4AQ7Z401 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DENND4AQ7Z401 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
DENND4AQ7Z401 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.48■■□□□ 1.51
DENND4AQ7Z401 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DENND4AQ7Z401 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.48■■□□□ 1.51
DENND4AQ7Z401 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.48■■□□□ 1.51
DENND4AQ7Z401 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
DENND4AQ7Z401 FOXO3B-201ENST00000395675 1928 ntBASIC24.46■■□□□ 1.51
DENND4AQ7Z401 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DENND4AQ7Z401 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
DENND4AQ7Z401 UNC93B3-201ENST00000308076 687 ntBASIC24.45■■□□□ 1.51
DENND4AQ7Z401 AC024257.2-201ENST00000549699 147 ntBASIC24.45■■□□□ 1.51
DENND4AQ7Z401 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.45■■□□□ 1.5
DENND4AQ7Z401 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
DENND4AQ7Z401 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DENND4AQ7Z401 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DENND4AQ7Z401 AL136162.1-201ENST00000607711 1078 ntBASIC24.45■■□□□ 1.5
DENND4AQ7Z401 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.45■■□□□ 1.5
DENND4AQ7Z401 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DENND4AQ7Z401 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DENND4AQ7Z401 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DENND4AQ7Z401 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DENND4AQ7Z401 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms