Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 ERN1-208ENST00000606895 2068 ntBASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM53Q6P2H8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM53Q6P2H8 AC093536.1-201ENST00000569153 554 ntBASIC21.21■□□□□ 0.99
TMEM53Q6P2H8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.21■□□□□ 0.99
TMEM53Q6P2H8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TMEM53Q6P2H8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM53Q6P2H8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TMEM53Q6P2H8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM53Q6P2H8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM53Q6P2H8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM53Q6P2H8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM53Q6P2H8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.18■□□□□ 0.98
TMEM53Q6P2H8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM53Q6P2H8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TMEM53Q6P2H8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM53Q6P2H8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TMEM53Q6P2H8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TMEM53Q6P2H8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TMEM53Q6P2H8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
TMEM53Q6P2H8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 AC092803.2-201ENST00000564287 1899 ntBASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.14■□□□□ 0.97
TMEM53Q6P2H8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 AC026202.3-201ENST00000600805 1127 ntBASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM53Q6P2H8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM53Q6P2H8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEM53Q6P2H8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TMEM53Q6P2H8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM53Q6P2H8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEM53Q6P2H8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM53Q6P2H8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 AC133552.2-201ENST00000619106 1032 ntBASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM53Q6P2H8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms