Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
RNF213Q63HN8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RNF213Q63HN8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF213Q63HN8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF213Q63HN8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 AL355802.2-201ENST00000402069 882 ntBASIC12.89□□□□□ -0.35
RNF213Q63HN8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RNF213Q63HN8 SF1-220ENST00000626028 704 ntTSL 2 BASIC12.89□□□□□ -0.35
RNF213Q63HN8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC12.88□□□□□ -0.35
RNF213Q63HN8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC12.88□□□□□ -0.35
RNF213Q63HN8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.88□□□□□ -0.35
RNF213Q63HN8 AF131216.4-201ENST00000638924 1588 ntBASIC12.88□□□□□ -0.35
RNF213Q63HN8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RNF213Q63HN8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.88□□□□□ -0.35
RNF213Q63HN8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RNF213Q63HN8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RNF213Q63HN8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RNF213Q63HN8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RNF213Q63HN8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 MIR4767-201ENST00000582827 78 ntBASIC12.87□□□□□ -0.35
RNF213Q63HN8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RNF213Q63HN8 CD99P1-205ENST00000527459 561 ntBASIC12.87□□□□□ -0.35
RNF213Q63HN8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RNF213Q63HN8 AC011551.1-201ENST00000614101 683 ntBASIC12.87□□□□□ -0.35
RNF213Q63HN8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RNF213Q63HN8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RNF213Q63HN8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RNF213Q63HN8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RNF213Q63HN8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RNF213Q63HN8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.86□□□□□ -0.35
RNF213Q63HN8 GAK-223ENST00000628912 497 ntTSL 5 BASIC12.86□□□□□ -0.35
RNF213Q63HN8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RNF213Q63HN8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RNF213Q63HN8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC12.85□□□□□ -0.35
RNF213Q63HN8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF213Q63HN8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF213Q63HN8 AC123595.1-201ENST00000440769 1046 ntBASIC12.85□□□□□ -0.35
RNF213Q63HN8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.85□□□□□ -0.35
RNF213Q63HN8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RNF213Q63HN8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF213Q63HN8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.85□□□□□ -0.35
RNF213Q63HN8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF213Q63HN8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC12.85□□□□□ -0.35
RNF213Q63HN8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RNF213Q63HN8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC12.85□□□□□ -0.35
RNF213Q63HN8 SYT6-210ENST00000641643 1587 ntBASIC12.84□□□□□ -0.35
RNF213Q63HN8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF213Q63HN8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF213Q63HN8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF213Q63HN8 SERBP1P1-201ENST00000396021 1160 ntBASIC12.84□□□□□ -0.35
RNF213Q63HN8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF213Q63HN8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF213Q63HN8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.84□□□□□ -0.35
RNF213Q63HN8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF213Q63HN8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RNF213Q63HN8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RNF213Q63HN8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RNF213Q63HN8 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.83□□□□□ -0.36
RNF213Q63HN8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF213Q63HN8 AC073111.5-205ENST00000641717 521 ntBASIC12.83□□□□□ -0.36
RNF213Q63HN8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF213Q63HN8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF213Q63HN8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF213Q63HN8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF213Q63HN8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF213Q63HN8 CROCCP5-201ENST00000436658 830 ntBASIC12.83□□□□□ -0.36
RNF213Q63HN8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF213Q63HN8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RNF213Q63HN8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF213Q63HN8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF213Q63HN8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF213Q63HN8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF213Q63HN8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF213Q63HN8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC12.82□□□□□ -0.36
RNF213Q63HN8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms