Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 BX664725.1-201ENST00000438252 379 ntBASIC27.22■■□□□ 1.95
CCDC144BQ3MJ40 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC144BQ3MJ40 MIR4787-201ENST00000607364 84 ntBASIC27.22■■□□□ 1.95
CCDC144BQ3MJ40 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CCDC144BQ3MJ40 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC144BQ3MJ40 KRT18P24-201ENST00000344739 1156 ntBASIC27.21■■□□□ 1.95
CCDC144BQ3MJ40 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
CCDC144BQ3MJ40 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.21■■□□□ 1.95
CCDC144BQ3MJ40 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.21■■□□□ 1.95
CCDC144BQ3MJ40 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
CCDC144BQ3MJ40 ERN1-208ENST00000606895 2068 ntBASIC27.21■■□□□ 1.95
CCDC144BQ3MJ40 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC144BQ3MJ40 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144BQ3MJ40 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144BQ3MJ40 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144BQ3MJ40 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144BQ3MJ40 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.19■■□□□ 1.94
CCDC144BQ3MJ40 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.19■■□□□ 1.94
CCDC144BQ3MJ40 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC144BQ3MJ40 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144BQ3MJ40 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144BQ3MJ40 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.18■■□□□ 1.94
CCDC144BQ3MJ40 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144BQ3MJ40 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144BQ3MJ40 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC144BQ3MJ40 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.18■■□□□ 1.94
CCDC144BQ3MJ40 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 AC142472.1-201ENST00000612013 1741 ntBASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
CCDC144BQ3MJ40 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144BQ3MJ40 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CCDC144BQ3MJ40 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144BQ3MJ40 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.16■■□□□ 1.94
CCDC144BQ3MJ40 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144BQ3MJ40 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC144BQ3MJ40 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC144BQ3MJ40 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144BQ3MJ40 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC144BQ3MJ40 UNC93B8-201ENST00000511903 705 ntBASIC27.15■■□□□ 1.94
CCDC144BQ3MJ40 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC144BQ3MJ40 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC144BQ3MJ40 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC144BQ3MJ40 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC144BQ3MJ40 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC144BQ3MJ40 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC144BQ3MJ40 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC144BQ3MJ40 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.14■■□□□ 1.93
CCDC144BQ3MJ40 AC008406.3-201ENST00000620001 1374 ntBASIC27.13■■□□□ 1.93
CCDC144BQ3MJ40 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.13■■□□□ 1.93
CCDC144BQ3MJ40 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC144BQ3MJ40 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.12■■□□□ 1.93
CCDC144BQ3MJ40 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144BQ3MJ40 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.12■■□□□ 1.93
CCDC144BQ3MJ40 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144BQ3MJ40 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144BQ3MJ40 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC144BQ3MJ40 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 AC120024.1-201ENST00000562672 995 ntBASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 AC137630.3-201ENST00000607245 391 ntBASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
CCDC144BQ3MJ40 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC144BQ3MJ40 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC27.09■■□□□ 1.93
CCDC144BQ3MJ40 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 KRT16P3-201ENST00000439127 1283 ntBASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CCDC144BQ3MJ40 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms