Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.44■□□□□ 0.7
ANKRD55Q3KP44 LINC01971-201ENST00000617888 1048 ntBASIC19.44■□□□□ 0.7
ANKRD55Q3KP44 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ANKRD55Q3KP44 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ANKRD55Q3KP44 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ANKRD55Q3KP44 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.41■□□□□ 0.7
ANKRD55Q3KP44 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ANKRD55Q3KP44 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.41■□□□□ 0.7
ANKRD55Q3KP44 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.41■□□□□ 0.7
ANKRD55Q3KP44 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ANKRD55Q3KP44 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ANKRD55Q3KP44 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.4■□□□□ 0.7
ANKRD55Q3KP44 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.4■□□□□ 0.7
ANKRD55Q3KP44 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ANKRD55Q3KP44 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ANKRD55Q3KP44 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ANKRD55Q3KP44 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 AC148477.6-201ENST00000623746 465 ntBASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.39■□□□□ 0.69
ANKRD55Q3KP44 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
ANKRD55Q3KP44 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ANKRD55Q3KP44 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ANKRD55Q3KP44 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.36■□□□□ 0.69
ANKRD55Q3KP44 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ANKRD55Q3KP44 AC008813.1-201ENST00000536597 885 ntBASIC19.36■□□□□ 0.69
ANKRD55Q3KP44 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ANKRD55Q3KP44 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ANKRD55Q3KP44 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ANKRD55Q3KP44 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ANKRD55Q3KP44 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 DUX4L11-201ENST00000611504 1267 ntBASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 DUX4L12-201ENST00000614593 1267 ntBASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 MIR6089-201ENST00000616698 64 ntBASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 DUX4L14-201ENST00000621227 1267 ntBASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.34■□□□□ 0.69
ANKRD55Q3KP44 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ANKRD55Q3KP44 AL117328.2-201ENST00000624617 1940 ntBASIC19.33■□□□□ 0.69
ANKRD55Q3KP44 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ANKRD55Q3KP44 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ANKRD55Q3KP44 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ANKRD55Q3KP44 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms