Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.41■■□□□ 1.18
RAB8AP61006 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB8AP61006 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB8AP61006 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RAB8AP61006 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAB8AP61006 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB8AP61006 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
RAB8AP61006 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB8AP61006 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.4■■□□□ 1.18
RAB8AP61006 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB8AP61006 AL592295.1-201ENST00000400984 884 ntBASIC22.4■■□□□ 1.18
RAB8AP61006 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.4■■□□□ 1.18
RAB8AP61006 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB8AP61006 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.4■■□□□ 1.18
RAB8AP61006 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.4■■□□□ 1.18
RAB8AP61006 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.4■■□□□ 1.18
RAB8AP61006 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB8AP61006 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAB8AP61006 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
RAB8AP61006 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAB8AP61006 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.39■■□□□ 1.18
RAB8AP61006 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAB8AP61006 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAB8AP61006 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAB8AP61006 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RAB8AP61006 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
RAB8AP61006 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAB8AP61006 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAB8AP61006 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAB8AP61006 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAB8AP61006 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RAB8AP61006 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAB8AP61006 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.38■■□□□ 1.17
RAB8AP61006 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAB8AP61006 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAB8AP61006 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAB8AP61006 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAB8AP61006 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAB8AP61006 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RAB8AP61006 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAB8AP61006 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.36■■□□□ 1.17
RAB8AP61006 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RAB8AP61006 AC103834.1-201ENST00000520383 144 ntBASIC22.36■■□□□ 1.17
RAB8AP61006 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RAB8AP61006 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RAB8AP61006 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAB8AP61006 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAB8AP61006 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.36■■□□□ 1.17
RAB8AP61006 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
RAB8AP61006 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RAB8AP61006 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.35■■□□□ 1.17
RAB8AP61006 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAB8AP61006 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAB8AP61006 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAB8AP61006 AC138932.3-201ENST00000567634 1902 ntBASIC22.35■■□□□ 1.17
RAB8AP61006 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAB8AP61006 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB8AP61006 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB8AP61006 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAB8AP61006 AC142381.3-201ENST00000568208 1670 ntBASIC22.34■■□□□ 1.17
RAB8AP61006 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB8AP61006 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RAB8AP61006 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.34■■□□□ 1.17
RAB8AP61006 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RAB8AP61006 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB8AP61006 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAB8AP61006 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAB8AP61006 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAB8AP61006 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAB8AP61006 YBX1P4-201ENST00000392794 808 ntBASIC22.33■■□□□ 1.17
RAB8AP61006 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.33■■□□□ 1.17
RAB8AP61006 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAB8AP61006 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.33■■□□□ 1.17
RAB8AP61006 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAB8AP61006 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.33■■□□□ 1.16
RAB8AP61006 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAB8AP61006 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.32■■□□□ 1.16
RAB8AP61006 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.32■■□□□ 1.16
RAB8AP61006 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.32■■□□□ 1.16
RAB8AP61006 AC022616.5-201ENST00000518796 181 ntBASIC22.32■■□□□ 1.16
RAB8AP61006 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.32■■□□□ 1.16
RAB8AP61006 MIR4508-201ENST00000584178 70 ntBASIC22.32■■□□□ 1.16
RAB8AP61006 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAB8AP61006 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RAB8AP61006 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RAB8AP61006 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAB8AP61006 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.31■■□□□ 1.16
RAB8AP61006 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAB8AP61006 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.31■■□□□ 1.16
RAB8AP61006 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.31■■□□□ 1.16
RAB8AP61006 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAB8AP61006 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.3■■□□□ 1.16
RAB8AP61006 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.3■■□□□ 1.16
RAB8AP61006 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.3■■□□□ 1.16
RAB8AP61006 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RAB8AP61006 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.3■■□□□ 1.16
RAB8AP61006 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RAB8AP61006 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
RAB8AP61006 RARRES2P1-201ENST00000474487 481 ntBASIC22.29■■□□□ 1.16
RAB8AP61006 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms