Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.89■■■□□ 2.54
RIPK4P57078 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RIPK4P57078 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
RIPK4P57078 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.88■■■□□ 2.53
RIPK4P57078 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RIPK4P57078 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RIPK4P57078 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RIPK4P57078 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
RIPK4P57078 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
RIPK4P57078 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RIPK4P57078 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.88■■■□□ 2.53
RIPK4P57078 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RIPK4P57078 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
RIPK4P57078 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.87■■■□□ 2.53
RIPK4P57078 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.87■■■□□ 2.53
RIPK4P57078 AC011551.1-201ENST00000614101 683 ntBASIC30.87■■■□□ 2.53
RIPK4P57078 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
RIPK4P57078 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RIPK4P57078 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.87■■■□□ 2.53
RIPK4P57078 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RIPK4P57078 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RIPK4P57078 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.86■■■□□ 2.53
RIPK4P57078 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.86■■■□□ 2.53
RIPK4P57078 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIPK4P57078 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.86■■■□□ 2.53
RIPK4P57078 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIPK4P57078 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIPK4P57078 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.85■■■□□ 2.53
RIPK4P57078 AC090877.2-201ENST00000558441 1738 ntBASIC30.85■■■□□ 2.53
RIPK4P57078 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
RIPK4P57078 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.85■■■□□ 2.53
RIPK4P57078 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.85■■■□□ 2.53
RIPK4P57078 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
RIPK4P57078 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.84■■■□□ 2.53
RIPK4P57078 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RIPK4P57078 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
RIPK4P57078 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RIPK4P57078 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.84■■■□□ 2.53
RIPK4P57078 MIR4281-201ENST00000580852 62 ntBASIC30.84■■■□□ 2.53
RIPK4P57078 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIPK4P57078 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.83■■■□□ 2.53
RIPK4P57078 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.83■■■□□ 2.53
RIPK4P57078 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
RIPK4P57078 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RIPK4P57078 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RIPK4P57078 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RIPK4P57078 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RIPK4P57078 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.82■■■□□ 2.52
RIPK4P57078 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RIPK4P57078 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RIPK4P57078 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RIPK4P57078 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
RIPK4P57078 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RIPK4P57078 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.82■■■□□ 2.52
RIPK4P57078 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.82■■■□□ 2.52
RIPK4P57078 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RIPK4P57078 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
RIPK4P57078 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
RIPK4P57078 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.81■■■□□ 2.52
RIPK4P57078 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.8■■■□□ 2.52
RIPK4P57078 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIPK4P57078 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RIPK4P57078 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RIPK4P57078 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RIPK4P57078 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.8■■■□□ 2.52
RIPK4P57078 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
RIPK4P57078 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RIPK4P57078 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.8■■■□□ 2.52
RIPK4P57078 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RIPK4P57078 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
RIPK4P57078 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
RIPK4P57078 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
RIPK4P57078 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
RIPK4P57078 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.79■■■□□ 2.52
RIPK4P57078 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.79■■■□□ 2.52
RIPK4P57078 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RIPK4P57078 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.77■■■□□ 2.52
RIPK4P57078 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
RIPK4P57078 AC239859.2-201ENST00000444165 318 ntBASIC30.77■■■□□ 2.52
RIPK4P57078 AC020928.2-201ENST00000588717 2197 ntBASIC30.77■■■□□ 2.52
RIPK4P57078 AC137630.3-201ENST00000607245 391 ntBASIC30.77■■■□□ 2.52
RIPK4P57078 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.77■■■□□ 2.52
RIPK4P57078 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
RIPK4P57078 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
RIPK4P57078 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RIPK4P57078 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
RIPK4P57078 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RIPK4P57078 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.76■■■□□ 2.51
RIPK4P57078 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RIPK4P57078 AC022211.4-201ENST00000625094 2161 ntBASIC30.76■■■□□ 2.51
RIPK4P57078 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RIPK4P57078 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.76■■■□□ 2.51
RIPK4P57078 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RIPK4P57078 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RIPK4P57078 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RIPK4P57078 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.75■■■□□ 2.51
RIPK4P57078 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIPK4P57078 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.75■■■□□ 2.51
RIPK4P57078 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIPK4P57078 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms