Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC6A9P48067 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A9P48067 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC6A9P48067 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A9P48067 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A9P48067 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A9P48067 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A9P48067 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A9P48067 AP003733.4-201ENST00000623785 1697 ntBASIC20.58■□□□□ 0.89
SLC6A9P48067 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A9P48067 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
SLC6A9P48067 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A9P48067 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.58■□□□□ 0.88
SLC6A9P48067 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A9P48067 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A9P48067 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A9P48067 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 AL592293.1-201ENST00000502889 1188 ntBASIC20.57■□□□□ 0.88
SLC6A9P48067 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 U85056.1-201ENST00000616429 682 ntBASIC20.57■□□□□ 0.88
SLC6A9P48067 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SLC6A9P48067 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC6A9P48067 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A9P48067 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC6A9P48067 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A9P48067 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A9P48067 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A9P48067 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A9P48067 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC6A9P48067 AC018755.3-202ENST00000596210 929 ntBASIC20.56■□□□□ 0.88
SLC6A9P48067 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC6A9P48067 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC6A9P48067 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A9P48067 AL139125.2-201ENST00000623134 1869 ntBASIC20.56■□□□□ 0.88
SLC6A9P48067 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A9P48067 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A9P48067 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A9P48067 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A9P48067 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A9P48067 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A9P48067 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A9P48067 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A9P48067 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A9P48067 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A9P48067 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A9P48067 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A9P48067 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A9P48067 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A9P48067 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A9P48067 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A9P48067 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A9P48067 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A9P48067 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A9P48067 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A9P48067 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A9P48067 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC6A9P48067 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A9P48067 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SLC6A9P48067 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC6A9P48067 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A9P48067 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC6A9P48067 FOXO3B-201ENST00000395675 1928 ntBASIC20.51■□□□□ 0.87
SLC6A9P48067 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A9P48067 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC6A9P48067 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A9P48067 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC6A9P48067 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC6A9P48067 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A9P48067 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A9P48067 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A9P48067 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A9P48067 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A9P48067 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC6A9P48067 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC6A9P48067 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A9P48067 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.5■□□□□ 0.87
SLC6A9P48067 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC6A9P48067 AC012354.3-201ENST00000623734 483 ntBASIC20.5■□□□□ 0.87
SLC6A9P48067 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC6A9P48067 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A9P48067 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC6A9P48067 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A9P48067 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC6A9P48067 LINC01124-201ENST00000409786 2117 ntBASIC20.49■□□□□ 0.87
SLC6A9P48067 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A9P48067 MIR6765-201ENST00000614092 87 ntBASIC20.49■□□□□ 0.87
SLC6A9P48067 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms