Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.36■■□□□ 1.33
CTSKP43235 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.36■■□□□ 1.33
CTSKP43235 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.36■■□□□ 1.33
CTSKP43235 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTSKP43235 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.35■■□□□ 1.33
CTSKP43235 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTSKP43235 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
CTSKP43235 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.35■■□□□ 1.33
CTSKP43235 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.35■■□□□ 1.33
CTSKP43235 AL139246.5-201ENST00000606645 996 ntBASIC23.35■■□□□ 1.33
CTSKP43235 MIR6724-1-201ENST00000616420 92 ntBASIC23.35■■□□□ 1.33
CTSKP43235 MIR6724-2-201ENST00000616483 92 ntBASIC23.35■■□□□ 1.33
CTSKP43235 MIR6724-4-201ENST00000617390 92 ntBASIC23.35■■□□□ 1.33
CTSKP43235 MIR6724-3-201ENST00000622482 92 ntBASIC23.35■■□□□ 1.33
CTSKP43235 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.35■■□□□ 1.33
CTSKP43235 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.35■■□□□ 1.33
CTSKP43235 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTSKP43235 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTSKP43235 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
CTSKP43235 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.34■■□□□ 1.33
CTSKP43235 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.34■■□□□ 1.33
CTSKP43235 MIR3621-201ENST00000580529 85 ntBASIC23.34■■□□□ 1.33
CTSKP43235 MTDHP2-201ENST00000601468 714 ntBASIC23.34■■□□□ 1.33
CTSKP43235 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.34■■□□□ 1.33
CTSKP43235 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CTSKP43235 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CTSKP43235 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CTSKP43235 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTSKP43235 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTSKP43235 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CTSKP43235 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CTSKP43235 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.33■■□□□ 1.33
CTSKP43235 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.33■■□□□ 1.33
CTSKP43235 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CTSKP43235 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.32■■□□□ 1.32
CTSKP43235 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.32■■□□□ 1.32
CTSKP43235 AL136116.3-201ENST00000402907 1138 ntBASIC23.32■■□□□ 1.32
CTSKP43235 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.32■■□□□ 1.32
CTSKP43235 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CTSKP43235 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CTSKP43235 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CTSKP43235 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CTSKP43235 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTSKP43235 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.31■■□□□ 1.32
CTSKP43235 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.31■■□□□ 1.32
CTSKP43235 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CTSKP43235 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTSKP43235 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.3■■□□□ 1.32
CTSKP43235 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CTSKP43235 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTSKP43235 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.3■■□□□ 1.32
CTSKP43235 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTSKP43235 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.3■■□□□ 1.32
CTSKP43235 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CTSKP43235 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CTSKP43235 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CTSKP43235 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.29■■□□□ 1.32
CTSKP43235 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTSKP43235 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.29■■□□□ 1.32
CTSKP43235 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTSKP43235 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.29■■□□□ 1.32
CTSKP43235 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CTSKP43235 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTSKP43235 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CTSKP43235 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.28■■□□□ 1.32
CTSKP43235 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CTSKP43235 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.28■■□□□ 1.32
CTSKP43235 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.28■■□□□ 1.32
CTSKP43235 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CTSKP43235 AL356740.2-201ENST00000601559 647 ntBASIC23.28■■□□□ 1.32
CTSKP43235 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.28■■□□□ 1.32
CTSKP43235 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.28■■□□□ 1.32
CTSKP43235 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.28■■□□□ 1.32
CTSKP43235 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.28■■□□□ 1.32
CTSKP43235 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTSKP43235 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CTSKP43235 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.27■■□□□ 1.32
CTSKP43235 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.27■■□□□ 1.32
CTSKP43235 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CTSKP43235 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.27■■□□□ 1.32
CTSKP43235 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.27■■□□□ 1.32
CTSKP43235 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CTSKP43235 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CTSKP43235 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CTSKP43235 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTSKP43235 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
CTSKP43235 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.26■■□□□ 1.31
CTSKP43235 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTSKP43235 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CTSKP43235 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTSKP43235 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTSKP43235 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTSKP43235 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.25■■□□□ 1.31
CTSKP43235 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTSKP43235 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CTSKP43235 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.25■■□□□ 1.31
CTSKP43235 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CTSKP43235 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.25■■□□□ 1.31
CTSKP43235 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.25■■□□□ 1.31
CTSKP43235 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms