Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 BBP1YPL255W 1158 nt6.67□□□□□ -1.34
RTR1P40084 THI21YPL258C 1656 nt6.66□□□□□ -1.34
RTR1P40084 THI4YGR144W 981 nt6.66□□□□□ -1.34
RTR1P40084 PRM10YJL108C 1152 nt6.66□□□□□ -1.34
RTR1P40084 ERG3YLR056W 1098 nt6.66□□□□□ -1.34
RTR1P40084 SEC13YLR208W 894 nt6.66□□□□□ -1.34
RTR1P40084 LEM3YNL323W 1245 nt6.66□□□□□ -1.34
RTR1P40084 YPL062WYPL062W 405 nt6.66□□□□□ -1.34
RTR1P40084 CLP1YOR250C 1338 nt6.66□□□□□ -1.34
RTR1P40084 YPT32YGL210W 669 nt6.65□□□□□ -1.34
RTR1P40084 PRP45YAL032C 1140 nt6.65□□□□□ -1.34
RTR1P40084 PNP1YLR209C 936 nt6.65□□□□□ -1.34
RTR1P40084 YML101C-AYML101C-A 318 nt6.65□□□□□ -1.34
RTR1P40084 FHN1YGR131W 525 nt6.64□□□□□ -1.35
RTR1P40084 LDB18YLL049W 540 nt6.64□□□□□ -1.35
RTR1P40084 POR1YNL055C 852 nt6.64□□□□□ -1.35
RTR1P40084 COQ6YGR255C 1440 nt6.64□□□□□ -1.35
RTR1P40084 TRP3YKL211C 1455 nt6.64□□□□□ -1.35
RTR1P40084 ATG20YDL113C 1923 nt6.64□□□□□ -1.35
RTR1P40084 GCS1YDL226C 1059 nt6.63□□□□□ -1.35
RTR1P40084 EFT2YDR385W 2529 nt6.63□□□□□ -1.35
RTR1P40084 TOS2YGR221C 1869 nt6.63□□□□□ -1.35
RTR1P40084 TNA1YGR260W 1605 nt6.63□□□□□ -1.35
RTR1P40084 YLR283WYLR283W 945 nt6.63□□□□□ -1.35
RTR1P40084 LAG2YOL025W 1983 nt6.63□□□□□ -1.35
RTR1P40084 EFT1YOR133W 2529 nt6.63□□□□□ -1.35
RTR1P40084 HSM3YBR272C 1443 nt6.63□□□□□ -1.35
RTR1P40084 GAL10YBR019C 2100 nt6.62□□□□□ -1.35
RTR1P40084 KIP2YPL155C 2121 nt6.62□□□□□ -1.35
RTR1P40084 NDC1YML031W 1968 nt6.62□□□□□ -1.35
RTR1P40084 SAC6YDR129C 1929 nt6.62□□□□□ -1.35
RTR1P40084 YAP1YML007W 1953 nt6.62□□□□□ -1.35
RTR1P40084 SFB3YHR098C 2790 nt6.62□□□□□ -1.35
RTR1P40084 BUD9YGR041W 1644 nt6.61□□□□□ -1.35
RTR1P40084 NQM1YGR043C 1002 nt6.61□□□□□ -1.35
RTR1P40084 MRPL15YLR312W-A 762 nt6.61□□□□□ -1.35
RTR1P40084 SCO1YBR037C 888 nt6.61□□□□□ -1.35
RTR1P40084 DCC1YCL016C 1143 nt6.61□□□□□ -1.35
RTR1P40084 RFA1YAR007C 1866 nt6.61□□□□□ -1.35
RTR1P40084 HPF1YOL155C 2904 nt6.61□□□□□ -1.35
RTR1P40084 VMA13YPR036W 1437 nt6.6□□□□□ -1.35
RTR1P40084 BRF1YGR246C 1791 nt6.6□□□□□ -1.35
RTR1P40084 RPL21BYPL079W 483 nt6.6□□□□□ -1.35
RTR1P40084 STE50YCL032W 1041 nt6.6□□□□□ -1.35
RTR1P40084 DAL4YIR028W 1908 nt6.6□□□□□ -1.35
RTR1P40084 GFA1YKL104C 2154 nt6.59□□□□□ -1.35
RTR1P40084 FOL1YNL256W 2475 nt6.59□□□□□ -1.35
RTR1P40084 CYC8YBR112C 2901 nt6.59□□□□□ -1.35
RTR1P40084 YDR134CYDR134C 411 nt6.59□□□□□ -1.35
RTR1P40084 HSP26YBR072W 645 nt6.59□□□□□ -1.35
RTR1P40084 ATG22YCL038C 1587 nt6.59□□□□□ -1.35
RTR1P40084 YBR284WYBR284W 2394 nt6.59□□□□□ -1.35
RTR1P40084 GSY2YLR258W 2118 nt6.58□□□□□ -1.36
RTR1P40084 AVT3YKL146W 2079 nt6.58□□□□□ -1.36
RTR1P40084 AIM3YBR108W 2844 nt6.58□□□□□ -1.36
RTR1P40084 VCX1YDL128W 1236 nt6.58□□□□□ -1.36
RTR1P40084 UTR4YEL038W 684 nt6.58□□□□□ -1.36
RTR1P40084 IDP3YNL009W 1263 nt6.58□□□□□ -1.36
RTR1P40084 SER1YOR184W 1188 nt6.58□□□□□ -1.36
RTR1P40084 SSO1YPL232W 873 nt6.58□□□□□ -1.36
RTR1P40084 YMR027WYMR027W 1413 nt6.58□□□□□ -1.36
RTR1P40084 EHD3YDR036C 1503 nt6.57□□□□□ -1.36
RTR1P40084 RPA49YNL248C 1248 nt6.57□□□□□ -1.36
RTR1P40084 SSZ1YHR064C 1617 nt6.57□□□□□ -1.36
RTR1P40084 YDR053WYDR053W 396 nt6.56□□□□□ -1.36
RTR1P40084 ATP14YLR295C 375 nt6.56□□□□□ -1.36
RTR1P40084 YOR024WYOR024W 324 nt6.56□□□□□ -1.36
RTR1P40084 RPT4YOR259C 1314 nt6.55□□□□□ -1.36
RTR1P40084 SGE1YPR198W 1632 nt6.55□□□□□ -1.36
RTR1P40084 ERI1YPL096C-A 207 nt6.55□□□□□ -1.36
RTR1P40084 MTC1YJL123C 1437 nt6.55□□□□□ -1.36
RTR1P40084 APJ1YNL077W 1587 nt6.55□□□□□ -1.36
RTR1P40084 ACC1YNR016C 6702 nt6.55□□□□□ -1.36
RTR1P40084 VTH1YIL173W 4650 nt6.55□□□□□ -1.36
RTR1P40084 VTH2YJL222W 4650 nt6.55□□□□□ -1.36
RTR1P40084 RIM101YHL027W 1878 nt6.54□□□□□ -1.36
RTR1P40084 YKL223WYKL223W 333 nt6.54□□□□□ -1.36
RTR1P40084 IES1YFL013C 2079 nt6.53□□□□□ -1.36
RTR1P40084 YKR041WYKR041W 753 nt6.53□□□□□ -1.36
RTR1P40084 SEH1YGL100W 1050 nt6.52□□□□□ -1.37
RTR1P40084 NAG1YGR031C-A 492 nt6.52□□□□□ -1.37
RTR1P40084 ECM3YOR092W 1842 nt6.51□□□□□ -1.37
RTR1P40084 ERD1YDR414C 1089 nt6.51□□□□□ -1.37
RTR1P40084 MTW1YAL034W-A 870 nt6.51□□□□□ -1.37
RTR1P40084 VPS70YJR126C 2436 nt6.5□□□□□ -1.37
RTR1P40084 SCM3YDL139C 672 nt6.5□□□□□ -1.37
RTR1P40084 MPM1YJL066C 759 nt6.5□□□□□ -1.37
RTR1P40084 BUD28YLR062C 378 nt6.5□□□□□ -1.37
RTR1P40084 YEL077CYEL077C 3834 nt6.49□□□□□ -1.37
RTR1P40084 PDC1YLR044C 1692 nt6.49□□□□□ -1.37
RTR1P40084 VHS1YDR247W 1386 nt6.49□□□□□ -1.37
RTR1P40084 RPN12YFR052W 825 nt6.49□□□□□ -1.37
RTR1P40084 MCM6YGL201C 3054 nt6.48□□□□□ -1.37
RTR1P40084 ATP4YPL078C 735 nt6.48□□□□□ -1.37
RTR1P40084 DAK1YML070W 1755 nt6.47□□□□□ -1.37
RTR1P40084 MNN10YDR245W 1182 nt6.47□□□□□ -1.37
RTR1P40084 FET3YMR058W 1911 nt6.46□□□□□ -1.37
RTR1P40084 BPL1YDL141W 2073 nt6.46□□□□□ -1.37
RTR1P40084 ADE4YMR300C 1533 nt6.46□□□□□ -1.37
RTR1P40084 BGL2YGR282C 942 nt6.46□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms