RNA–Protein interactions for RNA: YBR112C

CYC8, Transcript of General transcriptional co-repressor, yeastyeast

Gene CYC8, Length 2,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CYC8YBR112C RQC2Q12532 1038 aaKnown RBP10.1□□□□□ -0.79
CYC8YBR112C BFR2Q06631 534 aaKnown RBP9.98□□□□□ -0.81
CYC8YBR112C NOP2P40991 618 aaKnown RBP9.12□□□□□ -0.95
CYC8YBR112C CAB3P36076 571 aa8.98□□□□□ -0.97
CYC8YBR112C URN1Q06525 465 aaKnown RBP8.98□□□□□ -0.97
CYC8YBR112C EBP2P36049 427 aaKnown RBP8.97□□□□□ -0.97
CYC8YBR112C SIS2P36024 562 aa8.83□□□□□ -1
CYC8YBR112C NSR1P27476 414 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
CYC8YBR112C AVT3P36062 692 aa8.77□□□□□ -1.01
CYC8YBR112C TAF7Q05021 590 aa8.67□□□□□ -1.02
CYC8YBR112C YPR148CQ06523 435 aa8.66□□□□□ -1.02
CYC8YBR112C YFR016CP43597 1233 aaKnown RBP8.61□□□□□ -1.03
CYC8YBR112C CWC22P53333 577 aaKnown RBP8.39□□□□□ -1.07
CYC8YBR112C RPS0BP46654 252 aaKnown RBP8.33□□□□□ -1.08
CYC8YBR112C KRI1P42846 591 aaKnown RBP8.29□□□□□ -1.08
CYC8YBR112C DIP2Q12220 943 aaPredicted RBP8.28□□□□□ -1.08
CYC8YBR112C LEO1P38439 464 aa8.22□□□□□ -1.09
CYC8YBR112C AIM44Q99299 758 aa8.22□□□□□ -1.09
CYC8YBR112C RSE1Q04693 1361 aaKnown RBP8.2□□□□□ -1.1
CYC8YBR112C ENV11P53246 860 aa8.14□□□□□ -1.11
CYC8YBR112C MNN4P36044 1178 aa8.12□□□□□ -1.11
CYC8YBR112C TCB2P48231 1178 aa8.11□□□□□ -1.11
CYC8YBR112C PSH1Q12161 406 aa8.09□□□□□ -1.11
CYC8YBR112C YRB30P53107 440 aaPredicted RBP8.07□□□□□ -1.12
CYC8YBR112C DEF1P35732 738 aaKnown RBP8.06□□□□□ -1.12
CYC8YBR112C SPT21P35209 758 aa8.04□□□□□ -1.12
CYC8YBR112C ENP1P38333 483 aaKnown RBP7.99□□□□□ -1.13
CYC8YBR112C SEC3P33332 1336 aaKnown RBP7.98□□□□□ -1.13
CYC8YBR112C FPR3P38911 411 aaKnown RBP7.97□□□□□ -1.13
CYC8YBR112C IOC4Q04213 475 aa7.97□□□□□ -1.13
CYC8YBR112C TFA1P36100 482 aa7.97□□□□□ -1.13
CYC8YBR112C CLC1P17891 233 aa7.96□□□□□ -1.13
CYC8YBR112C SPT7P35177 1332 aa7.95□□□□□ -1.14
CYC8YBR112C SKI3P17883 1432 aaKnown RBP7.95□□□□□ -1.14
CYC8YBR112C NUG1P40010 520 aaKnown RBP7.95□□□□□ -1.14
CYC8YBR112C RNA1P11745 407 aaKnown RBP7.95□□□□□ -1.14
CYC8YBR112C NAP1P25293 417 aaKnown RBP7.93□□□□□ -1.14
CYC8YBR112C YGR130CP53278 816 aa7.92□□□□□ -1.14
CYC8YBR112C RLP24Q07915 199 aaKnown RBP7.92□□□□□ -1.14
CYC8YBR112C SPT2P06843 333 aaPredicted RBP7.9□□□□□ -1.15
CYC8YBR112C FPR4Q06205 392 aaPredicted RBP7.89□□□□□ -1.15
CYC8YBR112C SAS10Q12136 610 aaPredicted RBP7.89□□□□□ -1.15
CYC8YBR112C IME2P32581 645 aa7.88□□□□□ -1.15
CYC8YBR112C NOP53Q12080 455 aaKnown RBP7.86□□□□□ -1.15
CYC8YBR112C IFH1P39520 1085 aa7.84□□□□□ -1.15
CYC8YBR112C QCR6P00127 147 aa7.83□□□□□ -1.16
CYC8YBR112C SWE1P32944 819 aa7.82□□□□□ -1.16
CYC8YBR112C FUN12P39730 1002 aaKnown RBP7.8□□□□□ -1.16
CYC8YBR112C SPA2P23201 1466 aaKnown RBP7.8□□□□□ -1.16
CYC8YBR112C GRX3Q03835 250 aa7.78□□□□□ -1.16
CYC8YBR112C RLF2Q12495 606 aa7.78□□□□□ -1.16
CYC8YBR112C DRS1P32892 752 aaKnown RBP7.76□□□□□ -1.17
CYC8YBR112C PRS1P32895 427 aaKnown RBP7.75□□□□□ -1.17
CYC8YBR112C EAF7P53911 425 aaKnown RBP7.75□□□□□ -1.17
CYC8YBR112C DOS2P54858 310 aa7.75□□□□□ -1.17
CYC8YBR112C SSN2P38931 1420 aa7.74□□□□□ -1.17
CYC8YBR112C LEU3P08638 886 aa7.74□□□□□ -1.17
CYC8YBR112C TCB3Q03640 1545 aaKnown RBP7.74□□□□□ -1.17
CYC8YBR112C SGS1P35187 1447 aa7.73□□□□□ -1.17
CYC8YBR112C RAD26P40352 1085 aa7.72□□□□□ -1.17
CYC8YBR112C SPC110P32380 944 aa7.72□□□□□ -1.17
CYC8YBR112C OPY1P38271 328 aa7.72□□□□□ -1.17
CYC8YBR112C CFT1Q06632 1357 aaKnown RBP7.71□□□□□ -1.17
CYC8YBR112C NMD2P38798 1089 aaKnown RBP7.7□□□□□ -1.18
CYC8YBR112C MTC1P47018 478 aaKnown RBP7.69□□□□□ -1.18
CYC8YBR112C POL5P39985 1022 aaKnown RBP7.69□□□□□ -1.18
CYC8YBR112C YNL011CP53980 444 aa7.68□□□□□ -1.18
CYC8YBR112C STH1P32597 1359 aa7.68□□□□□ -1.18
CYC8YBR112C ETT1Q08421 412 aaKnown RBP7.67□□□□□ -1.18
CYC8YBR112C RPC31P17890 251 aa7.66□□□□□ -1.18
CYC8YBR112C RPN1P38764 993 aaKnown RBP7.66□□□□□ -1.18
CYC8YBR112C PAF1P38351 445 aa7.65□□□□□ -1.19
CYC8YBR112C HSP82P02829 709 aaKnown RBP7.64□□□□□ -1.19
CYC8YBR112C MSH3P25336 1018 aa7.64□□□□□ -1.19
CYC8YBR112C YTA7P40340 1379 aa7.64□□□□□ -1.19
CYC8YBR112C RIX1P38883 763 aaPredicted RBP7.63□□□□□ -1.19
CYC8YBR112C SNU71P53207 620 aaKnown RBP7.63□□□□□ -1.19
CYC8YBR112C CTR9P89105 1077 aa7.62□□□□□ -1.19
CYC8YBR112C ECM16Q04217 1267 aaKnown RBP7.62□□□□□ -1.19
CYC8YBR112C SNF7P39929 240 aaKnown RBP7.61□□□□□ -1.19
CYC8YBR112C CLB5P30283 435 aa7.6□□□□□ -1.19
CYC8YBR112C YPP1P46951 817 aa7.6□□□□□ -1.19
CYC8YBR112C NNF2P53253 936 aa7.59□□□□□ -1.19
CYC8YBR112C INO80P53115 1489 aa7.58□□□□□ -1.2
CYC8YBR112C MDG1P53885 366 aa7.58□□□□□ -1.2
CYC8YBR112C PIL1P53252 339 aaKnown RBP7.58□□□□□ -1.2
CYC8YBR112C SIC1P38634 284 aa7.57□□□□□ -1.2
CYC8YBR112C TIF4632P39936 914 aaKnown RBP7.57□□□□□ -1.2
CYC8YBR112C MSH4P40965 878 aaPredicted RBP7.56□□□□□ -1.2
CYC8YBR112C PLP2Q12017 286 aa7.56□□□□□ -1.2
CYC8YBR112C NOP58Q12499 511 aaKnown RBP7.56□□□□□ -1.2
CYC8YBR112C DJP1P40564 432 aa7.56□□□□□ -1.2
CYC8YBR112C VPS4P52917 437 aa7.56□□□□□ -1.2
CYC8YBR112C PAP2P53632 584 aaKnown RBP7.55□□□□□ -1.2
CYC8YBR112C DSN1P40568 576 aa7.54□□□□□ -1.2
CYC8YBR112C TOP1P04786 769 aa7.53□□□□□ -1.2
CYC8YBR112C ROX1P25042 368 aa7.53□□□□□ -1.2
CYC8YBR112C RPN7Q06103 429 aaKnown RBP7.53□□□□□ -1.2
CYC8YBR112C SSA1P10591 642 aaKnown RBP7.52□□□□□ -1.21
CYC8YBR112C SSA2P10592 639 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms