Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDNFP39905 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDNFP39905 SLC6A10P-202ENST00000431994 2058 ntBASIC20.32■□□□□ 0.84
GDNFP39905 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.32■□□□□ 0.84
GDNFP39905 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDNFP39905 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
GDNFP39905 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.31■□□□□ 0.84
GDNFP39905 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.31■□□□□ 0.84
GDNFP39905 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDNFP39905 AL359258.2-201ENST00000564063 1566 ntBASIC20.3■□□□□ 0.84
GDNFP39905 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDNFP39905 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GDNFP39905 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDNFP39905 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDNFP39905 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDNFP39905 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDNFP39905 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDNFP39905 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
GDNFP39905 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
GDNFP39905 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDNFP39905 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDNFP39905 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.29■□□□□ 0.84
GDNFP39905 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.29■□□□□ 0.84
GDNFP39905 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDNFP39905 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDNFP39905 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDNFP39905 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.28■□□□□ 0.84
GDNFP39905 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDNFP39905 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDNFP39905 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GDNFP39905 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GDNFP39905 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.28■□□□□ 0.84
GDNFP39905 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
GDNFP39905 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDNFP39905 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDNFP39905 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDNFP39905 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GDNFP39905 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDNFP39905 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
GDNFP39905 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GDNFP39905 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GDNFP39905 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GDNFP39905 AC004812.2-201ENST00000611079 2094 ntBASIC20.26■□□□□ 0.83
GDNFP39905 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDNFP39905 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDNFP39905 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.26■□□□□ 0.83
GDNFP39905 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDNFP39905 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
GDNFP39905 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDNFP39905 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
GDNFP39905 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDNFP39905 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GDNFP39905 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDNFP39905 C9orf163-202ENST00000624034 2573 ntBASIC20.25■□□□□ 0.83
GDNFP39905 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDNFP39905 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.25■□□□□ 0.83
GDNFP39905 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
GDNFP39905 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDNFP39905 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDNFP39905 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GDNFP39905 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDNFP39905 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GDNFP39905 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.24■□□□□ 0.83
GDNFP39905 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.24■□□□□ 0.83
GDNFP39905 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.24■□□□□ 0.83
GDNFP39905 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
GDNFP39905 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.24■□□□□ 0.83
GDNFP39905 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDNFP39905 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDNFP39905 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms