Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.73■□□□□ 0.91
CD40LGP29965 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.73■□□□□ 0.91
CD40LGP29965 SLC25A24-204ENST00000569674 2357 ntBASIC20.73■□□□□ 0.91
CD40LGP29965 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.73■□□□□ 0.91
CD40LGP29965 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.73■□□□□ 0.91
CD40LGP29965 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD40LGP29965 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD40LGP29965 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CD40LGP29965 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.72■□□□□ 0.91
CD40LGP29965 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.72■□□□□ 0.91
CD40LGP29965 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40LGP29965 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40LGP29965 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40LGP29965 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD40LGP29965 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.72■□□□□ 0.91
CD40LGP29965 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD40LGP29965 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CD40LGP29965 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD40LGP29965 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD40LGP29965 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.71■□□□□ 0.91
CD40LGP29965 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD40LGP29965 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD40LGP29965 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.71■□□□□ 0.91
CD40LGP29965 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD40LGP29965 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD40LGP29965 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.71■□□□□ 0.91
CD40LGP29965 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD40LGP29965 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.7■□□□□ 0.9
CD40LGP29965 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.7■□□□□ 0.9
CD40LGP29965 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD40LGP29965 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CD40LGP29965 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD40LGP29965 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD40LGP29965 SLC6A10P-202ENST00000431994 2058 ntBASIC20.69■□□□□ 0.9
CD40LGP29965 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CD40LGP29965 LINC00526-201ENST00000581067 1875 ntBASIC20.69■□□□□ 0.9
CD40LGP29965 AC007375.3-201ENST00000600936 2314 ntBASIC20.69■□□□□ 0.9
CD40LGP29965 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CD40LGP29965 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
CD40LGP29965 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD40LGP29965 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40LGP29965 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40LGP29965 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40LGP29965 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40LGP29965 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CD40LGP29965 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CD40LGP29965 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40LGP29965 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40LGP29965 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40LGP29965 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.67■□□□□ 0.9
CD40LGP29965 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD40LGP29965 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.67■□□□□ 0.9
CD40LGP29965 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CD40LGP29965 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD40LGP29965 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.67■□□□□ 0.9
CD40LGP29965 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD40LGP29965 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD40LGP29965 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD40LGP29965 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CD40LGP29965 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.67■□□□□ 0.9
CD40LGP29965 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.67■□□□□ 0.9
CD40LGP29965 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.66■□□□□ 0.9
CD40LGP29965 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.66■□□□□ 0.9
CD40LGP29965 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.66■□□□□ 0.9
CD40LGP29965 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40LGP29965 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40LGP29965 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40LGP29965 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40LGP29965 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CD40LGP29965 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40LGP29965 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40LGP29965 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40LGP29965 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40LGP29965 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD40LGP29965 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD40LGP29965 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD40LGP29965 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.64■□□□□ 0.89
CD40LGP29965 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.64■□□□□ 0.89
CD40LGP29965 DUX4L28-201ENST00000623687 678 ntBASIC20.64■□□□□ 0.89
CD40LGP29965 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CD40LGP29965 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD40LGP29965 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD40LGP29965 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD40LGP29965 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD40LGP29965 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD40LGP29965 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD40LGP29965 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD40LGP29965 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD40LGP29965 AL162393.1-201ENST00000437852 946 ntBASIC20.63■□□□□ 0.89
CD40LGP29965 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.63■□□□□ 0.89
CD40LGP29965 AC044849.2-201ENST00000606596 710 ntBASIC20.63■□□□□ 0.89
CD40LGP29965 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.63■□□□□ 0.89
CD40LGP29965 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms