Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CAPN1P07384 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CAPN1P07384 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CAPN1P07384 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CAPN1P07384 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CAPN1P07384 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.97■■□□□ 1.27
CAPN1P07384 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.97■■□□□ 1.27
CAPN1P07384 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CAPN1P07384 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CAPN1P07384 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CAPN1P07384 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.97■■□□□ 1.27
CAPN1P07384 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CAPN1P07384 PVT1_1.1-201ENST00000615125 194 ntBASIC22.97■■□□□ 1.27
CAPN1P07384 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CAPN1P07384 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CAPN1P07384 AP003733.4-201ENST00000623785 1697 ntBASIC22.97■■□□□ 1.27
CAPN1P07384 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.96■■□□□ 1.27
CAPN1P07384 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.96■■□□□ 1.27
CAPN1P07384 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CAPN1P07384 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CAPN1P07384 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CAPN1P07384 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.95■■□□□ 1.26
CAPN1P07384 AC139795.1-202ENST00000500444 432 ntBASIC22.95■■□□□ 1.26
CAPN1P07384 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.95■■□□□ 1.26
CAPN1P07384 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.95■■□□□ 1.26
CAPN1P07384 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
CAPN1P07384 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.95■■□□□ 1.26
CAPN1P07384 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.94■■□□□ 1.26
CAPN1P07384 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CAPN1P07384 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CAPN1P07384 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CAPN1P07384 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.94■■□□□ 1.26
CAPN1P07384 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.94■■□□□ 1.26
CAPN1P07384 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CAPN1P07384 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CAPN1P07384 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.93■■□□□ 1.26
CAPN1P07384 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.93■■□□□ 1.26
CAPN1P07384 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.93■■□□□ 1.26
CAPN1P07384 AC103834.1-201ENST00000520383 144 ntBASIC22.93■■□□□ 1.26
CAPN1P07384 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CAPN1P07384 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.93■■□□□ 1.26
CAPN1P07384 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CAPN1P07384 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
CAPN1P07384 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.92■■□□□ 1.26
CAPN1P07384 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.92■■□□□ 1.26
CAPN1P07384 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.92■■□□□ 1.26
CAPN1P07384 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.92■■□□□ 1.26
CAPN1P07384 AL451085.2-201ENST00000605085 799 ntBASIC22.92■■□□□ 1.26
CAPN1P07384 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CAPN1P07384 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CAPN1P07384 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CAPN1P07384 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CAPN1P07384 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CAPN1P07384 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CAPN1P07384 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.91■■□□□ 1.26
CAPN1P07384 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CAPN1P07384 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CAPN1P07384 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CAPN1P07384 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CAPN1P07384 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.9■■□□□ 1.26
CAPN1P07384 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.9■■□□□ 1.26
CAPN1P07384 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CAPN1P07384 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CAPN1P07384 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.9■■□□□ 1.26
CAPN1P07384 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.9■■□□□ 1.26
CAPN1P07384 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.9■■□□□ 1.26
CAPN1P07384 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.9■■□□□ 1.26
CAPN1P07384 KRT8P33-201ENST00000508125 1423 ntBASIC22.9■■□□□ 1.26
CAPN1P07384 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CAPN1P07384 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
CAPN1P07384 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.89■■□□□ 1.26
CAPN1P07384 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CAPN1P07384 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CAPN1P07384 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CAPN1P07384 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CAPN1P07384 LINC01124-201ENST00000409786 2117 ntBASIC22.89■■□□□ 1.25
CAPN1P07384 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.89■■□□□ 1.25
CAPN1P07384 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CAPN1P07384 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CAPN1P07384 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CAPN1P07384 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CAPN1P07384 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CAPN1P07384 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.88■■□□□ 1.25
CAPN1P07384 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.88■■□□□ 1.25
CAPN1P07384 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.88■■□□□ 1.25
CAPN1P07384 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CAPN1P07384 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CAPN1P07384 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.88■■□□□ 1.25
CAPN1P07384 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CAPN1P07384 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CAPN1P07384 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CAPN1P07384 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CAPN1P07384 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms