Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.74■■□□□ 1.39
MT-ND3P03897 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
MT-ND3P03897 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.74■■□□□ 1.39
MT-ND3P03897 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND3P03897 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.74■■□□□ 1.39
MT-ND3P03897 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND3P03897 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND3P03897 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND3P03897 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.73■■□□□ 1.39
MT-ND3P03897 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.73■■□□□ 1.39
MT-ND3P03897 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
MT-ND3P03897 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
MT-ND3P03897 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND3P03897 AC141586.4-201ENST00000624558 1573 ntBASIC23.73■■□□□ 1.39
MT-ND3P03897 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
MT-ND3P03897 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND3P03897 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND3P03897 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MT-ND3P03897 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.72■■□□□ 1.39
MT-ND3P03897 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.72■■□□□ 1.39
MT-ND3P03897 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.72■■□□□ 1.39
MT-ND3P03897 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
MT-ND3P03897 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.72■■□□□ 1.39
MT-ND3P03897 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
MT-ND3P03897 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MT-ND3P03897 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MT-ND3P03897 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
MT-ND3P03897 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
MT-ND3P03897 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MT-ND3P03897 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.71■■□□□ 1.39
MT-ND3P03897 AC133561.1-201ENST00000568600 2415 ntBASIC23.71■■□□□ 1.39
MT-ND3P03897 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MT-ND3P03897 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MT-ND3P03897 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND3P03897 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND3P03897 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.7■■□□□ 1.38
MT-ND3P03897 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
MT-ND3P03897 AL157400.5-201ENST00000507624 621 ntBASIC23.7■■□□□ 1.38
MT-ND3P03897 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.7■■□□□ 1.38
MT-ND3P03897 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND3P03897 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND3P03897 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.7■■□□□ 1.38
MT-ND3P03897 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND3P03897 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
MT-ND3P03897 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.7■■□□□ 1.38
MT-ND3P03897 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.69■■□□□ 1.38
MT-ND3P03897 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND3P03897 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND3P03897 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND3P03897 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
MT-ND3P03897 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.69■■□□□ 1.38
MT-ND3P03897 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND3P03897 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND3P03897 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
MT-ND3P03897 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND3P03897 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND3P03897 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND3P03897 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.68■■□□□ 1.38
MT-ND3P03897 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND3P03897 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND3P03897 AL033527.3-201ENST00000566366 1196 ntBASIC23.68■■□□□ 1.38
MT-ND3P03897 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND3P03897 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
MT-ND3P03897 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
MT-ND3P03897 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-ND3P03897 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MT-ND3P03897 AC007029.1-201ENST00000604183 313 ntBASIC23.67■■□□□ 1.38
MT-ND3P03897 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-ND3P03897 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-ND3P03897 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
MT-ND3P03897 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.67■■□□□ 1.38
MT-ND3P03897 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-ND3P03897 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
MT-ND3P03897 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MT-ND3P03897 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.66■■□□□ 1.38
MT-ND3P03897 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-ND3P03897 KRT18P60-201ENST00000312876 1297 ntBASIC23.66■■□□□ 1.38
MT-ND3P03897 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-ND3P03897 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-ND3P03897 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.66■■□□□ 1.38
MT-ND3P03897 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-ND3P03897 TSPY13P-201ENST00000338964 914 ntBASIC23.65■■□□□ 1.38
MT-ND3P03897 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MT-ND3P03897 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.65■■□□□ 1.38
MT-ND3P03897 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.65■■□□□ 1.38
MT-ND3P03897 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MT-ND3P03897 SMPD5-203ENST00000639008 1464 ntBASIC23.64■■□□□ 1.38
MT-ND3P03897 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
MT-ND3P03897 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MT-ND3P03897 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MT-ND3P03897 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms