Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.95■□□□□ 0.94
CLDN1O95832 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLDN1O95832 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.95■□□□□ 0.94
CLDN1O95832 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.95■□□□□ 0.94
CLDN1O95832 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLDN1O95832 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN1O95832 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN1O95832 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN1O95832 BX255925.1-201ENST00000566954 1854 ntBASIC20.94■□□□□ 0.94
CLDN1O95832 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN1O95832 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN1O95832 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN1O95832 AC105265.2-201ENST00000467189 838 ntBASIC20.94■□□□□ 0.94
CLDN1O95832 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN1O95832 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN1O95832 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN1O95832 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN1O95832 AL121749.1-202ENST00000609313 2153 ntBASIC20.94■□□□□ 0.94
CLDN1O95832 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN1O95832 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN1O95832 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN1O95832 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN1O95832 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN1O95832 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.93■□□□□ 0.94
CLDN1O95832 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDN1O95832 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN1O95832 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN1O95832 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN1O95832 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN1O95832 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN1O95832 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CLDN1O95832 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN1O95832 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.92■□□□□ 0.94
CLDN1O95832 MIR6821-201ENST00000617625 74 ntBASIC20.92■□□□□ 0.94
CLDN1O95832 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLDN1O95832 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN1O95832 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLDN1O95832 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLDN1O95832 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN1O95832 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN1O95832 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN1O95832 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
CLDN1O95832 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CLDN1O95832 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN1O95832 EDA-201ENST00000338901 1233 ntBASIC20.9■□□□□ 0.94
CLDN1O95832 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN1O95832 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.9■□□□□ 0.94
CLDN1O95832 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN1O95832 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.9■□□□□ 0.94
CLDN1O95832 AL355001.2-201ENST00000620617 1191 ntBASIC20.9■□□□□ 0.94
CLDN1O95832 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.9■□□□□ 0.94
CLDN1O95832 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN1O95832 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLDN1O95832 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN1O95832 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN1O95832 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLDN1O95832 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
CLDN1O95832 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.89■□□□□ 0.93
CLDN1O95832 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CLDN1O95832 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLDN1O95832 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.88■□□□□ 0.93
CLDN1O95832 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN1O95832 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLDN1O95832 AL162430.1-201ENST00000480705 870 ntBASIC20.88■□□□□ 0.93
CLDN1O95832 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN1O95832 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN1O95832 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN1O95832 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLDN1O95832 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLDN1O95832 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN1O95832 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN1O95832 AC024257.2-201ENST00000549699 147 ntBASIC20.87■□□□□ 0.93
CLDN1O95832 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN1O95832 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CLDN1O95832 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN1O95832 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN1O95832 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLDN1O95832 AC097381.1-201ENST00000429019 1296 ntBASIC20.86■□□□□ 0.93
CLDN1O95832 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.86■□□□□ 0.93
CLDN1O95832 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN1O95832 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN1O95832 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN1O95832 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN1O95832 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.86■□□□□ 0.93
CLDN1O95832 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN1O95832 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN1O95832 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN1O95832 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.85■□□□□ 0.93
CLDN1O95832 AC087623.3-201ENST00000607047 1098 ntBASIC20.85■□□□□ 0.93
CLDN1O95832 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN1O95832 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN1O95832 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN1O95832 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms