Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK3AO75631 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21■□□□□ 0.95
UPK3AO75631 HYI-210ENST00000486909 905 ntTSL 5 BASIC21■□□□□ 0.95
UPK3AO75631 AC139795.1-202ENST00000500444 432 ntBASIC21■□□□□ 0.95
UPK3AO75631 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPK3AO75631 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3AO75631 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3AO75631 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3AO75631 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
UPK3AO75631 AP003733.4-201ENST00000623785 1697 ntBASIC20.99■□□□□ 0.95
UPK3AO75631 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3AO75631 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
UPK3AO75631 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3AO75631 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3AO75631 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.99■□□□□ 0.95
UPK3AO75631 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPK3AO75631 BHLHE23-202ENST00000612929 1109 ntBASIC20.99■□□□□ 0.95
UPK3AO75631 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.99■□□□□ 0.95
UPK3AO75631 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UPK3AO75631 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UPK3AO75631 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3AO75631 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UPK3AO75631 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UPK3AO75631 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UPK3AO75631 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
UPK3AO75631 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3AO75631 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3AO75631 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UPK3AO75631 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK3AO75631 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3AO75631 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3AO75631 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3AO75631 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3AO75631 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.97■□□□□ 0.95
UPK3AO75631 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.97■□□□□ 0.95
UPK3AO75631 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.97■□□□□ 0.95
UPK3AO75631 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.97■□□□□ 0.95
UPK3AO75631 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3AO75631 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3AO75631 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
UPK3AO75631 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK3AO75631 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UPK3AO75631 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK3AO75631 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK3AO75631 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK3AO75631 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK3AO75631 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK3AO75631 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.96■□□□□ 0.95
UPK3AO75631 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.96■□□□□ 0.95
UPK3AO75631 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK3AO75631 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.96■□□□□ 0.95
UPK3AO75631 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
UPK3AO75631 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPK3AO75631 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK3AO75631 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
UPK3AO75631 LINC01124-201ENST00000409786 2117 ntBASIC20.95■□□□□ 0.94
UPK3AO75631 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPK3AO75631 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK3AO75631 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.95■□□□□ 0.94
UPK3AO75631 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.95■□□□□ 0.94
UPK3AO75631 LONRF2P2-201ENST00000439212 571 ntBASIC20.95■□□□□ 0.94
UPK3AO75631 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.95■□□□□ 0.94
UPK3AO75631 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.95■□□□□ 0.94
UPK3AO75631 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPK3AO75631 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK3AO75631 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.95■□□□□ 0.94
UPK3AO75631 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
UPK3AO75631 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UPK3AO75631 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPK3AO75631 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
UPK3AO75631 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
UPK3AO75631 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.94■□□□□ 0.94
UPK3AO75631 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK3AO75631 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK3AO75631 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPK3AO75631 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UPK3AO75631 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
UPK3AO75631 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK3AO75631 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK3AO75631 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPK3AO75631 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK3AO75631 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK3AO75631 AC010980.1-201ENST00000587192 1142 ntBASIC20.93■□□□□ 0.94
UPK3AO75631 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.93■□□□□ 0.94
UPK3AO75631 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK3AO75631 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK3AO75631 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK3AO75631 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
UPK3AO75631 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.92■□□□□ 0.94
UPK3AO75631 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms