Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF9O43307 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF9O43307 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.48■■□□□ 1.03
ARHGEF9O43307 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.48■■□□□ 1.03
ARHGEF9O43307 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF9O43307 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ARHGEF9O43307 LINC00543-201ENST00000567234 1845 ntBASIC21.48■■□□□ 1.03
ARHGEF9O43307 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ARHGEF9O43307 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF9O43307 SMPD5-203ENST00000639008 1464 ntBASIC21.47■■□□□ 1.03
ARHGEF9O43307 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF9O43307 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF9O43307 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ARHGEF9O43307 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF9O43307 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.47■■□□□ 1.03
ARHGEF9O43307 AC025884.2-201ENST00000553429 711 ntBASIC21.47■■□□□ 1.03
ARHGEF9O43307 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF9O43307 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.47■■□□□ 1.03
ARHGEF9O43307 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF9O43307 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF9O43307 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
ARHGEF9O43307 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF9O43307 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGEF9O43307 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 AC133561.1-201ENST00000568600 2415 ntBASIC21.46■■□□□ 1.03
ARHGEF9O43307 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF9O43307 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF9O43307 AC012676.1-201ENST00000574705 1949 ntBASIC21.45■■□□□ 1.02
ARHGEF9O43307 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF9O43307 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF9O43307 MIR3960-201ENST00000583311 91 ntBASIC21.45■■□□□ 1.02
ARHGEF9O43307 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF9O43307 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF9O43307 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
ARHGEF9O43307 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.45■■□□□ 1.02
ARHGEF9O43307 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARHGEF9O43307 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ARHGEF9O43307 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ARHGEF9O43307 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARHGEF9O43307 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF9O43307 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.43■■□□□ 1.02
ARHGEF9O43307 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.43■■□□□ 1.02
ARHGEF9O43307 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF9O43307 PKD1P6-201ENST00000343738 4769 ntBASIC21.43■■□□□ 1.02
ARHGEF9O43307 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
ARHGEF9O43307 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ARHGEF9O43307 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.42■■□□□ 1.02
ARHGEF9O43307 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARHGEF9O43307 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARHGEF9O43307 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ARHGEF9O43307 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
ARHGEF9O43307 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ARHGEF9O43307 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ARHGEF9O43307 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.41■■□□□ 1.02
ARHGEF9O43307 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.41■■□□□ 1.02
ARHGEF9O43307 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARHGEF9O43307 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ARHGEF9O43307 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARHGEF9O43307 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.4■■□□□ 1.02
ARHGEF9O43307 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.4■■□□□ 1.02
ARHGEF9O43307 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARHGEF9O43307 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.4■■□□□ 1.02
ARHGEF9O43307 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
ARHGEF9O43307 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ARHGEF9O43307 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARHGEF9O43307 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARHGEF9O43307 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ARHGEF9O43307 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.39■■□□□ 1.02
ARHGEF9O43307 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
ARHGEF9O43307 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ARHGEF9O43307 AC022211.4-201ENST00000625094 2161 ntBASIC21.39■■□□□ 1.01
ARHGEF9O43307 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ARHGEF9O43307 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.39■■□□□ 1.01
ARHGEF9O43307 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ARHGEF9O43307 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ARHGEF9O43307 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ARHGEF9O43307 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ARHGEF9O43307 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.38■■□□□ 1.01
ARHGEF9O43307 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.38■■□□□ 1.01
ARHGEF9O43307 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.38■■□□□ 1.01
ARHGEF9O43307 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARHGEF9O43307 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARHGEF9O43307 AC142381.3-201ENST00000568208 1670 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms