Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.52■■□□□ 1.2
NDUFS4O43181 AC138932.3-201ENST00000567634 1902 ntBASIC22.52■■□□□ 1.2
NDUFS4O43181 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NDUFS4O43181 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.52■■□□□ 1.2
NDUFS4O43181 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NDUFS4O43181 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NDUFS4O43181 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS4O43181 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.51■■□□□ 1.19
NDUFS4O43181 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS4O43181 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS4O43181 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS4O43181 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS4O43181 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS4O43181 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
NDUFS4O43181 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS4O43181 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS4O43181 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS4O43181 AL592295.1-201ENST00000400984 884 ntBASIC22.5■■□□□ 1.19
NDUFS4O43181 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.5■■□□□ 1.19
NDUFS4O43181 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.5■■□□□ 1.19
NDUFS4O43181 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS4O43181 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
NDUFS4O43181 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.49■■□□□ 1.19
NDUFS4O43181 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NDUFS4O43181 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NDUFS4O43181 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NDUFS4O43181 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
NDUFS4O43181 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NDUFS4O43181 KRT8P33-201ENST00000508125 1423 ntBASIC22.48■■□□□ 1.19
NDUFS4O43181 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS4O43181 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.48■■□□□ 1.19
NDUFS4O43181 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS4O43181 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NDUFS4O43181 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.47■■□□□ 1.19
NDUFS4O43181 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
NDUFS4O43181 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.47■■□□□ 1.19
NDUFS4O43181 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.47■■□□□ 1.19
NDUFS4O43181 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.47■■□□□ 1.19
NDUFS4O43181 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.47■■□□□ 1.19
NDUFS4O43181 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NDUFS4O43181 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS4O43181 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS4O43181 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS4O43181 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS4O43181 AC022616.5-201ENST00000518796 181 ntBASIC22.46■■□□□ 1.19
NDUFS4O43181 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS4O43181 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS4O43181 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
NDUFS4O43181 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS4O43181 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
NDUFS4O43181 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS4O43181 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS4O43181 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS4O43181 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS4O43181 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
NDUFS4O43181 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.44■■□□□ 1.18
NDUFS4O43181 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS4O43181 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
NDUFS4O43181 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS4O43181 MIR6089-201ENST00000616698 64 ntBASIC22.44■■□□□ 1.18
NDUFS4O43181 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.43■■□□□ 1.18
NDUFS4O43181 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
NDUFS4O43181 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.43■■□□□ 1.18
NDUFS4O43181 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS4O43181 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS4O43181 YBX1P4-201ENST00000392794 808 ntBASIC22.43■■□□□ 1.18
NDUFS4O43181 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
NDUFS4O43181 MIR4508-201ENST00000584178 70 ntBASIC22.43■■□□□ 1.18
NDUFS4O43181 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS4O43181 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.42■■□□□ 1.18
NDUFS4O43181 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NDUFS4O43181 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
NDUFS4O43181 AC103834.1-201ENST00000520383 144 ntBASIC22.42■■□□□ 1.18
NDUFS4O43181 AP003733.4-201ENST00000623785 1697 ntBASIC22.42■■□□□ 1.18
NDUFS4O43181 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.41■■□□□ 1.18
NDUFS4O43181 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.41■■□□□ 1.18
NDUFS4O43181 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NDUFS4O43181 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.4■■□□□ 1.18
NDUFS4O43181 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.4■■□□□ 1.18
NDUFS4O43181 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS4O43181 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS4O43181 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS4O43181 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.4■■□□□ 1.18
NDUFS4O43181 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.4■■□□□ 1.18
NDUFS4O43181 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS4O43181 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.39■■□□□ 1.18
NDUFS4O43181 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS4O43181 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS4O43181 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS4O43181 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS4O43181 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NDUFS4O43181 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
NDUFS4O43181 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS4O43181 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NDUFS4O43181 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.38■■□□□ 1.17
NDUFS4O43181 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
NDUFS4O43181 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS4O43181 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS4O43181 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.38■■□□□ 1.17
NDUFS4O43181 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms