Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
PIK3C2AO00443 TFPT-201ENST00000391757 774 ntTSL 5 BASIC32.09■■■□□ 2.73
PIK3C2AO00443 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
PIK3C2AO00443 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.09■■■□□ 2.73
PIK3C2AO00443 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
PIK3C2AO00443 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
PIK3C2AO00443 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
PIK3C2AO00443 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC32.08■■■□□ 2.73
PIK3C2AO00443 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
PIK3C2AO00443 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PIK3C2AO00443 AC096631.2-201ENST00000436136 790 ntBASIC32.07■■■□□ 2.72
PIK3C2AO00443 CLTA-206ENST00000466396 695 ntTSL 2 BASIC32.07■■■□□ 2.72
PIK3C2AO00443 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PIK3C2AO00443 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PIK3C2AO00443 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PIK3C2AO00443 AK3-203ENST00000447596 705 ntTSL 2 BASIC32.06■■■□□ 2.72
PIK3C2AO00443 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PIK3C2AO00443 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PIK3C2AO00443 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PIK3C2AO00443 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC32.06■■■□□ 2.72
PIK3C2AO00443 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC32.06■■■□□ 2.72
PIK3C2AO00443 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PIK3C2AO00443 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC32.05■■■□□ 2.72
PIK3C2AO00443 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC32.05■■■□□ 2.72
PIK3C2AO00443 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.05■■■□□ 2.72
PIK3C2AO00443 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC32.05■■■□□ 2.72
PIK3C2AO00443 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PIK3C2AO00443 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC32.04■■■□□ 2.72
PIK3C2AO00443 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.04■■■□□ 2.72
PIK3C2AO00443 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PIK3C2AO00443 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PIK3C2AO00443 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PIK3C2AO00443 AL356740.2-201ENST00000601559 647 ntBASIC32.03■■■□□ 2.72
PIK3C2AO00443 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PIK3C2AO00443 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC32.02■■■□□ 2.72
PIK3C2AO00443 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC32.02■■■□□ 2.72
PIK3C2AO00443 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.02■■■□□ 2.72
PIK3C2AO00443 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
PIK3C2AO00443 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PIK3C2AO00443 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
PIK3C2AO00443 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.01■■■□□ 2.72
PIK3C2AO00443 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
PIK3C2AO00443 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
PIK3C2AO00443 ERN1-208ENST00000606895 2068 ntBASIC32■■■□□ 2.71
PIK3C2AO00443 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PIK3C2AO00443 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
PIK3C2AO00443 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.99■■■□□ 2.71
PIK3C2AO00443 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.99■■■□□ 2.71
PIK3C2AO00443 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PIK3C2AO00443 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.99■■■□□ 2.71
PIK3C2AO00443 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PIK3C2AO00443 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC31.99■■■□□ 2.71
PIK3C2AO00443 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
PIK3C2AO00443 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.98■■■□□ 2.71
PIK3C2AO00443 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PIK3C2AO00443 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PIK3C2AO00443 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
PIK3C2AO00443 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.97■■■□□ 2.71
PIK3C2AO00443 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.96■■■□□ 2.71
PIK3C2AO00443 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PIK3C2AO00443 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.96■■■□□ 2.71
PIK3C2AO00443 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
PIK3C2AO00443 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.96■■■□□ 2.71
PIK3C2AO00443 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PIK3C2AO00443 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
PIK3C2AO00443 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PIK3C2AO00443 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
PIK3C2AO00443 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PIK3C2AO00443 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
PIK3C2AO00443 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
PIK3C2AO00443 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.95■■■□□ 2.7
PIK3C2AO00443 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
PIK3C2AO00443 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PIK3C2AO00443 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
PIK3C2AO00443 AC090877.2-201ENST00000558441 1738 ntBASIC31.94■■■□□ 2.7
PIK3C2AO00443 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.94■■■□□ 2.7
PIK3C2AO00443 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.94■■■□□ 2.7
PIK3C2AO00443 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
PIK3C2AO00443 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PIK3C2AO00443 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.93■■■□□ 2.7
PIK3C2AO00443 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
PIK3C2AO00443 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PIK3C2AO00443 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PIK3C2AO00443 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PIK3C2AO00443 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.91■■■□□ 2.7
PIK3C2AO00443 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PIK3C2AO00443 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
PIK3C2AO00443 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.91■■■□□ 2.7
PIK3C2AO00443 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PIK3C2AO00443 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
PIK3C2AO00443 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PIK3C2AO00443 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PIK3C2AO00443 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.89■■■□□ 2.7
PIK3C2AO00443 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.89■■■□□ 2.7
PIK3C2AO00443 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PIK3C2AO00443 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.89■■■□□ 2.7
PIK3C2AO00443 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PIK3C2AO00443 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PIK3C2AO00443 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PIK3C2AO00443 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms