Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 AC133552.2-201ENST00000619106 1032 ntBASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RFPL4AA6NLU0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 AC009831.1-201ENST00000580420 1582 ntBASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFPL4AA6NLU0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFPL4AA6NLU0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFPL4AA6NLU0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.1■□□□□ 0.81
RFPL4AA6NLU0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFPL4AA6NLU0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RFPL4AA6NLU0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.1■□□□□ 0.81
RFPL4AA6NLU0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.1■□□□□ 0.81
RFPL4AA6NLU0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFPL4AA6NLU0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFPL4AA6NLU0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.09■□□□□ 0.81
RFPL4AA6NLU0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFPL4AA6NLU0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFPL4AA6NLU0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFPL4AA6NLU0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.08■□□□□ 0.81
RFPL4AA6NLU0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFPL4AA6NLU0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RFPL4AA6NLU0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFPL4AA6NLU0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFPL4AA6NLU0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFPL4AA6NLU0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFPL4AA6NLU0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RFPL4AA6NLU0 AC097639.1-201ENST00000565519 1891 ntBASIC20.06■□□□□ 0.8
RFPL4AA6NLU0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.06■□□□□ 0.8
RFPL4AA6NLU0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFPL4AA6NLU0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 AL592293.1-201ENST00000502889 1188 ntBASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFPL4AA6NLU0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.03■□□□□ 0.8
RFPL4AA6NLU0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL4AA6NLU0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFPL4AA6NLU0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms