Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
SPDYE3A6NKU9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 BX664725.1-201ENST00000438252 379 ntBASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.81■■□□□ 1.88
SPDYE3A6NKU9 AC090877.2-201ENST00000558441 1738 ntBASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 Z92544.1-202ENST00000571933 1220 ntBASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SPDYE3A6NKU9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 AC239859.2-201ENST00000444165 318 ntBASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SPDYE3A6NKU9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 AC137630.3-201ENST00000607245 391 ntBASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.78■■□□□ 1.88
SPDYE3A6NKU9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.77■■□□□ 1.88
SPDYE3A6NKU9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 KRT125P-201ENST00000546827 989 ntBASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.76■■□□□ 1.87
SPDYE3A6NKU9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPDYE3A6NKU9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPDYE3A6NKU9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.74■■□□□ 1.87
SPDYE3A6NKU9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPDYE3A6NKU9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.72■■□□□ 1.87
SPDYE3A6NKU9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 GUSBP5-201ENST00000418136 578 ntBASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.71■■□□□ 1.87
SPDYE3A6NKU9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SPDYE3A6NKU9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
SPDYE3A6NKU9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SPDYE3A6NKU9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.7■■□□□ 1.86
SPDYE3A6NKU9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SPDYE3A6NKU9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 MIR4787-201ENST00000607364 84 ntBASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 AC021242.3-201ENST00000607598 1377 ntBASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
SPDYE3A6NKU9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SPDYE3A6NKU9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SPDYE3A6NKU9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms