Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MEIS3P1A6NDR6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MEIS3P1A6NDR6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MEIS3P1A6NDR6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20■□□□□ 0.79
MEIS3P1A6NDR6 HLA-V-202ENST00000446817 847 ntBASIC20■□□□□ 0.79
MEIS3P1A6NDR6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20■□□□□ 0.79
MEIS3P1A6NDR6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MEIS3P1A6NDR6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MEIS3P1A6NDR6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L13-201ENST00000554103 1267 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L15-201ENST00000611059 1267 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L23-201ENST00000615195 1269 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L24-201ENST00000617576 1269 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L22-201ENST00000618238 1269 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L20-201ENST00000619712 1269 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L21-201ENST00000622058 1269 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L10-201ENST00000622460 1267 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 DUX4L25-201ENST00000624915 1269 ntBASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
MEIS3P1A6NDR6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 LINC01971-201ENST00000617888 1048 ntBASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.98■□□□□ 0.79
MEIS3P1A6NDR6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MEIS3P1A6NDR6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MEIS3P1A6NDR6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MEIS3P1A6NDR6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MEIS3P1A6NDR6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
MEIS3P1A6NDR6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MEIS3P1A6NDR6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MEIS3P1A6NDR6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 CLDN5-201ENST00000403084 2357 ntBASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
MEIS3P1A6NDR6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MEIS3P1A6NDR6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
MEIS3P1A6NDR6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MEIS3P1A6NDR6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MEIS3P1A6NDR6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.92■□□□□ 0.78
MEIS3P1A6NDR6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms