Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AC097639.1-201ENST00000565519 1891 ntBASIC21.66■■□□□ 1.06
SH3D21A4FU49 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.66■■□□□ 1.06
SH3D21A4FU49 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.66■■□□□ 1.06
SH3D21A4FU49 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.66■■□□□ 1.06
SH3D21A4FU49 RP9P-202ENST00000450133 1212 ntBASIC21.66■■□□□ 1.06
SH3D21A4FU49 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SH3D21A4FU49 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3D21A4FU49 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3D21A4FU49 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3D21A4FU49 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SH3D21A4FU49 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3D21A4FU49 RARRES2P1-201ENST00000474487 481 ntBASIC21.65■■□□□ 1.06
SH3D21A4FU49 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
SH3D21A4FU49 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.65■■□□□ 1.06
SH3D21A4FU49 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3D21A4FU49 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3D21A4FU49 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SH3D21A4FU49 LINC00543-201ENST00000567234 1845 ntBASIC21.64■■□□□ 1.06
SH3D21A4FU49 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SH3D21A4FU49 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3D21A4FU49 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SH3D21A4FU49 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.64■■□□□ 1.05
SH3D21A4FU49 AC093536.1-201ENST00000569153 554 ntBASIC21.64■■□□□ 1.05
SH3D21A4FU49 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SH3D21A4FU49 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3D21A4FU49 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3D21A4FU49 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SH3D21A4FU49 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SH3D21A4FU49 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SH3D21A4FU49 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3D21A4FU49 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3D21A4FU49 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3D21A4FU49 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SH3D21A4FU49 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.63■■□□□ 1.05
SH3D21A4FU49 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3D21A4FU49 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3D21A4FU49 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3D21A4FU49 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.62■■□□□ 1.05
SH3D21A4FU49 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3D21A4FU49 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3D21A4FU49 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3D21A4FU49 AC141586.4-201ENST00000624558 1573 ntBASIC21.61■■□□□ 1.05
SH3D21A4FU49 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SH3D21A4FU49 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3D21A4FU49 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3D21A4FU49 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.61■■□□□ 1.05
SH3D21A4FU49 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3D21A4FU49 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3D21A4FU49 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
SH3D21A4FU49 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3D21A4FU49 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3D21A4FU49 MIR3960-201ENST00000583311 91 ntBASIC21.61■■□□□ 1.05
SH3D21A4FU49 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3D21A4FU49 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
SH3D21A4FU49 AC068473.5-201ENST00000616428 2072 ntBASIC21.6■■□□□ 1.05
SH3D21A4FU49 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.6■■□□□ 1.05
SH3D21A4FU49 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH3D21A4FU49 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.6■■□□□ 1.05
SH3D21A4FU49 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH3D21A4FU49 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.6■■□□□ 1.05
SH3D21A4FU49 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SH3D21A4FU49 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SH3D21A4FU49 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3D21A4FU49 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3D21A4FU49 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SH3D21A4FU49 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3D21A4FU49 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.59■■□□□ 1.05
SH3D21A4FU49 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
SH3D21A4FU49 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3D21A4FU49 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3D21A4FU49 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3D21A4FU49 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.59■■□□□ 1.05
SH3D21A4FU49 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3D21A4FU49 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH3D21A4FU49 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3D21A4FU49 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.58■■□□□ 1.05
SH3D21A4FU49 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH3D21A4FU49 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SH3D21A4FU49 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.58■■□□□ 1.05
SH3D21A4FU49 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
SH3D21A4FU49 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH3D21A4FU49 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
SH3D21A4FU49 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3D21A4FU49 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.57■■□□□ 1.04
SH3D21A4FU49 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3D21A4FU49 DUX4L9-201ENST00000449051 1259 ntBASIC21.57■■□□□ 1.04
SH3D21A4FU49 RAP2CP1-202ENST00000605179 643 ntBASIC21.57■■□□□ 1.04
SH3D21A4FU49 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3D21A4FU49 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3D21A4FU49 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SH3D21A4FU49 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3D21A4FU49 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms