Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRBV6-1A0A0K0K1D8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRBV6-1A0A0K0K1D8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-1A0A0K0K1D8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-1A0A0K0K1D8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-1A0A0K0K1D8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV6-1A0A0K0K1D8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 DUX4L11-201ENST00000611504 1267 ntBASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 DUX4L12-201ENST00000614593 1267 ntBASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 DUX4L14-201ENST00000621227 1267 ntBASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 HLA-L-211ENST00000482052 1765 ntBASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV6-1A0A0K0K1D8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-1A0A0K0K1D8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-1A0A0K0K1D8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRBV6-1A0A0K0K1D8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 AL117328.2-201ENST00000624617 1940 ntBASIC17.53■□□□□ 0.4
TRBV6-1A0A0K0K1D8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-1A0A0K0K1D8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-1A0A0K0K1D8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRBV6-1A0A0K0K1D8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV6-1A0A0K0K1D8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 MIR3960-201ENST00000583311 91 ntBASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.49■□□□□ 0.39
TRBV6-1A0A0K0K1D8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms