Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 AC074183.2-201ENST00000623112 922 ntBASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV7-1A0A0A6YYK4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 AC004987.1-201ENST00000428627 508 ntBASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 BHLHE23-202ENST00000612929 1109 ntBASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 AC012354.3-201ENST00000623734 483 ntBASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV7-1A0A0A6YYK4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 AC022616.5-201ENST00000518796 181 ntBASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-1A0A0A6YYK4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV7-1A0A0A6YYK4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV7-1A0A0A6YYK4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-1A0A0A6YYK4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV7-1A0A0A6YYK4 AL139125.2-201ENST00000623134 1869 ntBASIC18.16■□□□□ 0.5
TRBV7-1A0A0A6YYK4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRBV7-1A0A0A6YYK4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRBV7-1A0A0A6YYK4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-1A0A0A6YYK4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 AC090877.2-201ENST00000558441 1738 ntBASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV7-1A0A0A6YYK4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.14■□□□□ 0.5
TRBV7-1A0A0A6YYK4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV7-1A0A0A6YYK4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV7-1A0A0A6YYK4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms