Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 AC009831.1-201ENST00000580420 1582 ntBASIC21.23■□□□□ 0.99
TRAV27A0A087WT01 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV27A0A087WT01 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.21■□□□□ 0.99
TRAV27A0A087WT01 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 FOXO3B-201ENST00000395675 1928 ntBASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 AC133552.2-201ENST00000619106 1032 ntBASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAV27A0A087WT01 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV27A0A087WT01 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV27A0A087WT01 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAV27A0A087WT01 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 AC141586.4-201ENST00000624558 1573 ntBASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV27A0A087WT01 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 RNF126P1-201ENST00000567452 1320 ntBASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV27A0A087WT01 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 KRT18P10-201ENST00000388836 1287 ntBASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 AC004812.2-201ENST00000611079 2094 ntBASIC21.16■□□□□ 0.98
TRAV27A0A087WT01 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV27A0A087WT01 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV27A0A087WT01 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV27A0A087WT01 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
TRAV27A0A087WT01 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV27A0A087WT01 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV27A0A087WT01 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV27A0A087WT01 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.14■□□□□ 0.97
TRAV27A0A087WT01 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV27A0A087WT01 HLA-L-211ENST00000482052 1765 ntBASIC21.14■□□□□ 0.97
TRAV27A0A087WT01 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.14■□□□□ 0.97
TRAV27A0A087WT01 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV27A0A087WT01 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRAV27A0A087WT01 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV27A0A087WT01 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.13■□□□□ 0.97
TRAV27A0A087WT01 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV27A0A087WT01 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.13■□□□□ 0.97
TRAV27A0A087WT01 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV27A0A087WT01 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.13■□□□□ 0.97
TRAV27A0A087WT01 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV27A0A087WT01 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms