Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV6A0A075B6T7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV6A0A075B6T7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV6A0A075B6T7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV6A0A075B6T7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 AL024507.2-201ENST00000606070 2574 ntBASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV6A0A075B6T7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRAV6A0A075B6T7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV6A0A075B6T7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV6A0A075B6T7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV6A0A075B6T7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.02■□□□□ 0.8
TRAV6A0A075B6T7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 RARRES2P7-201ENST00000567349 469 ntBASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV6A0A075B6T7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20■□□□□ 0.79
TRAV6A0A075B6T7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV6A0A075B6T7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV6A0A075B6T7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV6A0A075B6T7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.96■□□□□ 0.79
TRAV6A0A075B6T7 AC108673.1-201ENST00000510422 1159 ntBASIC19.96■□□□□ 0.79
TRAV6A0A075B6T7 CAHM-201ENST00000604200 896 ntBASIC19.96■□□□□ 0.79
TRAV6A0A075B6T7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV6A0A075B6T7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAV6A0A075B6T7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAV6A0A075B6T7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV6A0A075B6T7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV6A0A075B6T7 MIR762-201ENST00000390236 83 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms