Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 LINC01124-201ENST00000409786 2117 ntBASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRBV25-1A0A075B6N4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
TRBV25-1A0A075B6N4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV25-1A0A075B6N4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV25-1A0A075B6N4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 MIR3648-2-201ENST00000581792 180 ntBASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 MIR3648-1-201ENST00000615959 180 ntBASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV25-1A0A075B6N4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV25-1A0A075B6N4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV25-1A0A075B6N4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 AL024507.2-201ENST00000606070 2574 ntBASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 AC096887.2-201ENST00000623443 1957 ntBASIC16.73■□□□□ 0.27
TRBV25-1A0A075B6N4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV25-1A0A075B6N4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 AC016575.1-201ENST00000607026 382 ntBASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV25-1A0A075B6N4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV25-1A0A075B6N4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV25-1A0A075B6N4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV25-1A0A075B6N4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV25-1A0A075B6N4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV25-1A0A075B6N4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV25-1A0A075B6N4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms