Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
PCDHGB4Q9UN71 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PCDHGB4Q9UN71 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.6■■■□□ 2.01
PCDHGB4Q9UN71 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
PCDHGB4Q9UN71 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHGB4Q9UN71 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHGB4Q9UN71 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHGB4Q9UN71 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.55■■■□□ 2
PCDHGB4Q9UN71 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.54■■■□□ 2
PCDHGB4Q9UN71 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
PCDHGB4Q9UN71 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.54■■■□□ 2
PCDHGB4Q9UN71 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHGB4Q9UN71 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHGB4Q9UN71 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCDHGB4Q9UN71 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PCDHGB4Q9UN71 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
PCDHGB4Q9UN71 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHGB4Q9UN71 AC145285.7-201ENST00000614819 1539 ntBASIC27.5■■□□□ 1.99
PCDHGB4Q9UN71 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.5■■□□□ 1.99
PCDHGB4Q9UN71 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGB4Q9UN71 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHGB4Q9UN71 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHGB4Q9UN71 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
PCDHGB4Q9UN71 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGB4Q9UN71 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGB4Q9UN71 AC015813.7-201ENST00000623294 581 ntBASIC27.4■■□□□ 1.98
PCDHGB4Q9UN71 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
PCDHGB4Q9UN71 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.37■■□□□ 1.97
PCDHGB4Q9UN71 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGB4Q9UN71 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.34■■□□□ 1.97
PCDHGB4Q9UN71 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHGB4Q9UN71 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHGB4Q9UN71 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
PCDHGB4Q9UN71 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGB4Q9UN71 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHGB4Q9UN71 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHGB4Q9UN71 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGB4Q9UN71 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGB4Q9UN71 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHGB4Q9UN71 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGB4Q9UN71 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.19■■□□□ 1.94
PCDHGB4Q9UN71 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHGB4Q9UN71 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGB4Q9UN71 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
PCDHGB4Q9UN71 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGB4Q9UN71 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHGB4Q9UN71 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGB4Q9UN71 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGB4Q9UN71 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHGB4Q9UN71 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.1■■□□□ 1.93
PCDHGB4Q9UN71 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGB4Q9UN71 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGB4Q9UN71 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGB4Q9UN71 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHGB4Q9UN71 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGB4Q9UN71 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PCDHGB4Q9UN71 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGB4Q9UN71 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHGB4Q9UN71 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHGB4Q9UN71 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGB4Q9UN71 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHGB4Q9UN71 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGB4Q9UN71 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
PCDHGB4Q9UN71 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
PCDHGB4Q9UN71 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PCDHGB4Q9UN71 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
PCDHGB4Q9UN71 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGB4Q9UN71 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGB4Q9UN71 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHGB4Q9UN71 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHGB4Q9UN71 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
PCDHGB4Q9UN71 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGB4Q9UN71 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGB4Q9UN71 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.87■■□□□ 1.89
PCDHGB4Q9UN71 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.87■■□□□ 1.89
PCDHGB4Q9UN71 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHGB4Q9UN71 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGB4Q9UN71 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.83■■□□□ 1.89
PCDHGB4Q9UN71 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGB4Q9UN71 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHGB4Q9UN71 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHGB4Q9UN71 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDHGB4Q9UN71 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHGB4Q9UN71 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHGB4Q9UN71 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.76■■□□□ 1.87
PCDHGB4Q9UN71 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGB4Q9UN71 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGB4Q9UN71 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGB4Q9UN71 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHGB4Q9UN71 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGB4Q9UN71 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHGB4Q9UN71 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHGB4Q9UN71 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHGB4Q9UN71 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGB4Q9UN71 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
PCDHGB4Q9UN71 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHGB4Q9UN71 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGB4Q9UN71 AC006077.2-201ENST00000623591 457 ntBASIC26.66■■□□□ 1.86
PCDHGB4Q9UN71 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGB4Q9UN71 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms