Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.39■■■□□ 2.94
KRT40Q6A162 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC33.37■■■□□ 2.93
KRT40Q6A162 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
KRT40Q6A162 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
KRT40Q6A162 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
KRT40Q6A162 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
KRT40Q6A162 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.24■■■□□ 2.91
KRT40Q6A162 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
KRT40Q6A162 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
KRT40Q6A162 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
KRT40Q6A162 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
KRT40Q6A162 AP002365.1-201ENST00000603448 772 ntBASIC33.12■■■□□ 2.89
KRT40Q6A162 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
KRT40Q6A162 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC33.11■■■□□ 2.89
KRT40Q6A162 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
KRT40Q6A162 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
KRT40Q6A162 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
KRT40Q6A162 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.06■■■□□ 2.88
KRT40Q6A162 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
KRT40Q6A162 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
KRT40Q6A162 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
KRT40Q6A162 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
KRT40Q6A162 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
KRT40Q6A162 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
KRT40Q6A162 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.97■■■□□ 2.87
KRT40Q6A162 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.95■■■□□ 2.87
KRT40Q6A162 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.94■■■□□ 2.86
KRT40Q6A162 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
KRT40Q6A162 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
KRT40Q6A162 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.93■■■□□ 2.86
KRT40Q6A162 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.93■■■□□ 2.86
KRT40Q6A162 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
KRT40Q6A162 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.91■■■□□ 2.86
KRT40Q6A162 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
KRT40Q6A162 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
KRT40Q6A162 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.9■■■□□ 2.86
KRT40Q6A162 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
KRT40Q6A162 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
KRT40Q6A162 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
KRT40Q6A162 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
KRT40Q6A162 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.84■■■□□ 2.85
KRT40Q6A162 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.82■■■□□ 2.85
KRT40Q6A162 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
KRT40Q6A162 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
KRT40Q6A162 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.78■■■□□ 2.84
KRT40Q6A162 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.78■■■□□ 2.84
KRT40Q6A162 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.77■■■□□ 2.84
KRT40Q6A162 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.76■■■□□ 2.83
KRT40Q6A162 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
KRT40Q6A162 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
KRT40Q6A162 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.73■■■□□ 2.83
KRT40Q6A162 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
KRT40Q6A162 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.69■■■□□ 2.82
KRT40Q6A162 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
KRT40Q6A162 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.69■■■□□ 2.82
KRT40Q6A162 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
KRT40Q6A162 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
KRT40Q6A162 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.65■■■□□ 2.82
KRT40Q6A162 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
KRT40Q6A162 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.61■■■□□ 2.81
KRT40Q6A162 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
KRT40Q6A162 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.6■■■□□ 2.81
KRT40Q6A162 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
KRT40Q6A162 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
KRT40Q6A162 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.56■■■□□ 2.8
KRT40Q6A162 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
KRT40Q6A162 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.52■■■□□ 2.8
KRT40Q6A162 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
KRT40Q6A162 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
KRT40Q6A162 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
KRT40Q6A162 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
KRT40Q6A162 DYNLL1-208ENST00000550178 581 ntBASIC32.49■■■□□ 2.79
KRT40Q6A162 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.49■■■□□ 2.79
KRT40Q6A162 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.47■■■□□ 2.79
KRT40Q6A162 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
KRT40Q6A162 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
KRT40Q6A162 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
KRT40Q6A162 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.45■■■□□ 2.78
KRT40Q6A162 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
KRT40Q6A162 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
KRT40Q6A162 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
KRT40Q6A162 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.42■■■□□ 2.78
KRT40Q6A162 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.41■■■□□ 2.78
KRT40Q6A162 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
KRT40Q6A162 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
KRT40Q6A162 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.39■■■□□ 2.78
KRT40Q6A162 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
KRT40Q6A162 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
KRT40Q6A162 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
KRT40Q6A162 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
KRT40Q6A162 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
KRT40Q6A162 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
KRT40Q6A162 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
KRT40Q6A162 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
KRT40Q6A162 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
KRT40Q6A162 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
KRT40Q6A162 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
KRT40Q6A162 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.32■■■□□ 2.76
KRT40Q6A162 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.31■■■□□ 2.76
KRT40Q6A162 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms