Protein–RNA interactions for Protein: Q04301

VBA1, Vacuolar basic amino acid transporter 1, yeastyeast

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA1Q04301 LSM3YLR438C-A 270 nt10.75□□□□□ -0.69
VBA1Q04301 NVJ2YPR091C 2313 nt10.75□□□□□ -0.69
VBA1Q04301 YSC84YHR016C 1407 nt10.75□□□□□ -0.69
VBA1Q04301 GFD2YCL036W 1701 nt10.74□□□□□ -0.69
VBA1Q04301 WWM1YFL010C 636 nt10.72□□□□□ -0.69
VBA1Q04301 ART5YGR068C 1761 nt10.72□□□□□ -0.69
VBA1Q04301 YHL050CYHL050C 2094 nt10.69□□□□□ -0.7
VBA1Q04301 Q0182Q0182 405 nt10.68□□□□□ -0.7
VBA1Q04301 RTS2YOR077W 699 nt10.68□□□□□ -0.7
VBA1Q04301 RTF1YGL244W 1677 nt10.65□□□□□ -0.7
VBA1Q04301 PET9YBL030C 957 nt10.62□□□□□ -0.71
VBA1Q04301 CUE1YMR264W 612 nt10.59□□□□□ -0.71
VBA1Q04301 RRT12YCR045C 1476 nt10.59□□□□□ -0.71
VBA1Q04301 YFL021C-AYFL021C-A 855 nt10.57□□□□□ -0.72
VBA1Q04301 YGR021WYGR021W 873 nt10.57□□□□□ -0.72
VBA1Q04301 BOP3YNL042W 1191 nt10.54□□□□□ -0.72
VBA1Q04301 YCH1YGR203W 447 nt10.52□□□□□ -0.73
VBA1Q04301 PTK1YKL198C 1989 nt10.5□□□□□ -0.73
VBA1Q04301 YNL195CYNL195C 786 nt10.49□□□□□ -0.73
VBA1Q04301 TIR4YOR009W 1464 nt10.49□□□□□ -0.73
VBA1Q04301 SHU1YHL006C 453 nt10.47□□□□□ -0.73
VBA1Q04301 YIL100WYIL100W 354 nt10.44□□□□□ -0.74
VBA1Q04301 HOM6YJR139C 1080 nt10.44□□□□□ -0.74
VBA1Q04301 YMR057CYMR057C 372 nt10.41□□□□□ -0.74
VBA1Q04301 FPS1YLL043W 2010 nt10.4□□□□□ -0.74
VBA1Q04301 YAL037C-BYAL037C-B 975 nt10.4□□□□□ -0.74
VBA1Q04301 NCP1YHR042W 2076 nt10.38□□□□□ -0.75
VBA1Q04301 YJL225CYJL225C 5277 nt10.38□□□□□ -0.75
VBA1Q04301 YLR236CYLR236C 324 nt10.33□□□□□ -0.76
VBA1Q04301 MNP1YGL068W 585 nt10.32□□□□□ -0.76
VBA1Q04301 YKL097CYKL097C 411 nt10.3□□□□□ -0.76
VBA1Q04301 RKM5YLR137W 1104 nt10.29□□□□□ -0.76
VBA1Q04301 YFL054CYFL054C 1941 nt10.25□□□□□ -0.77
VBA1Q04301 NPL3YDR432W 1245 nt10.23□□□□□ -0.77
VBA1Q04301 SPT8YLR055C 1809 nt10.22□□□□□ -0.77
VBA1Q04301 BOR1YNL275W 1731 nt10.19□□□□□ -0.78
VBA1Q04301 LCB1YMR296C 1677 nt10.17□□□□□ -0.78
VBA1Q04301 YCL048W-AYCL048W-A 240 nt10.15□□□□□ -0.78
VBA1Q04301 YJL152WYJL152W 360 nt10.13□□□□□ -0.79
VBA1Q04301 YLR154C-GYLR154C-G 150 nt10.1□□□□□ -0.79
VBA1Q04301 YOL037CYOL037C 354 nt10.09□□□□□ -0.79
VBA1Q04301 UME6YDR207C 2511 nt10.04□□□□□ -0.8
VBA1Q04301 SWE1YJL187C 2460 nt10.02□□□□□ -0.81
VBA1Q04301 MOT3YMR070W 1473 nt9.98□□□□□ -0.81
VBA1Q04301 LYS4YDR234W 2082 nt9.98□□□□□ -0.81
VBA1Q04301 HSP60YLR259C 1719 nt9.96□□□□□ -0.81
VBA1Q04301 RRD1YIL153W 1182 nt9.95□□□□□ -0.82
VBA1Q04301 RDN37-1RDN37-1 5354 nt9.93□□□□□ -0.82
VBA1Q04301 RDN37-2RDN37-2 5354 nt9.93□□□□□ -0.82
VBA1Q04301 SIM1YIL123W 1431 nt9.93□□□□□ -0.82
VBA1Q04301 FMP52YER004W 696 nt9.92□□□□□ -0.82
VBA1Q04301 PCM1YEL058W 1674 nt9.9□□□□□ -0.82
VBA1Q04301 YOR139CYOR139C 393 nt9.88□□□□□ -0.83
VBA1Q04301 WHI5YOR083W 888 nt9.85□□□□□ -0.83
VBA1Q04301 DED1YOR204W 1815 nt9.84□□□□□ -0.83
VBA1Q04301 ALG12YNR030W 1656 nt9.83□□□□□ -0.84
VBA1Q04301 GLK1YCL040W 1503 nt9.83□□□□□ -0.84
VBA1Q04301 BIO4YNR057C 714 nt9.83□□□□□ -0.84
VBA1Q04301 IDH1YNL037C 1083 nt9.82□□□□□ -0.84
VBA1Q04301 YLR281CYLR281C 468 nt9.81□□□□□ -0.84
VBA1Q04301 MCH5YOR306C 1566 nt9.8□□□□□ -0.84
VBA1Q04301 FMT1YBL013W 1206 nt9.79□□□□□ -0.84
VBA1Q04301 GBP2YCL011C 1284 nt9.79□□□□□ -0.84
VBA1Q04301 TCD2YKL027W 1344 nt9.77□□□□□ -0.85
VBA1Q04301 ADH2YMR303C 1047 nt9.76□□□□□ -0.85
VBA1Q04301 SNF6YHL025W 999 nt9.75□□□□□ -0.85
VBA1Q04301 FUR4YBR021W 1902 nt9.75□□□□□ -0.85
VBA1Q04301 CWP1YKL096W 720 nt9.73□□□□□ -0.85
VBA1Q04301 CRR1YLR213C 1269 nt9.73□□□□□ -0.85
VBA1Q04301 YHR056W-AYHR056W-A 435 nt9.72□□□□□ -0.85
VBA1Q04301 ERF2YLR246W 1080 nt9.72□□□□□ -0.85
VBA1Q04301 IMP2'YIL154C 1041 nt9.71□□□□□ -0.86
VBA1Q04301 CCA1YER168C 1641 nt9.65□□□□□ -0.86
VBA1Q04301 PUS2YGL063W 1113 nt9.64□□□□□ -0.87
VBA1Q04301 DSK2YMR276W 1122 nt9.64□□□□□ -0.87
VBA1Q04301 YIH1YCR059C 777 nt9.63□□□□□ -0.87
VBA1Q04301 SOR2YDL246C 1074 nt9.63□□□□□ -0.87
VBA1Q04301 SOR1YJR159W 1074 nt9.63□□□□□ -0.87
VBA1Q04301 PRP4YPR178W 1398 nt9.63□□□□□ -0.87
VBA1Q04301 HEM12YDR047W 1089 nt9.62□□□□□ -0.87
VBA1Q04301 MIC10YCL057C-A 294 nt9.62□□□□□ -0.87
VBA1Q04301 YEL076C-AYEL076C-A 651 nt9.61□□□□□ -0.87
VBA1Q04301 YEL076CYEL076C 651 nt9.61□□□□□ -0.87
VBA1Q04301 YLR464WYLR464W 651 nt9.61□□□□□ -0.87
VBA1Q04301 RAX1YOR301W 1308 nt9.6□□□□□ -0.87
VBA1Q04301 YDR433WYDR433W 441 nt9.6□□□□□ -0.87
VBA1Q04301 AAC1YMR056C 930 nt9.6□□□□□ -0.87
VBA1Q04301 YLL053CYLL053C 459 nt9.59□□□□□ -0.87
VBA1Q04301 DPS1YLL018C 1674 nt9.58□□□□□ -0.88
VBA1Q04301 ATF2YGR177C 1608 nt9.58□□□□□ -0.88
VBA1Q04301 SNG1YGR197C 1644 nt9.56□□□□□ -0.88
VBA1Q04301 RNQ1YCL028W 1218 nt9.56□□□□□ -0.88
VBA1Q04301 NAR1YNL240C 1476 nt9.55□□□□□ -0.88
VBA1Q04301 MXR2YCL033C 507 nt9.55□□□□□ -0.88
VBA1Q04301 YCL042WYCL042W 360 nt9.54□□□□□ -0.88
VBA1Q04301 tM(CAU)CtM(CAU)C 72 nt9.53□□□□□ -0.88
VBA1Q04301 IMT4tM(CAU)E 72 nt9.53□□□□□ -0.88
VBA1Q04301 IMT3tM(CAU)J3 72 nt9.53□□□□□ -0.88
VBA1Q04301 IMT1tM(CAU)O1 72 nt9.53□□□□□ -0.88
VBA1Q04301 IMT2tM(CAU)P 72 nt9.53□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 9.4 ms