Protein–RNA interactions for Protein: Q04272

VPS20, Vacuolar protein sorting-associated protein 20, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS20Q04272 TAT1YBR069C 1860 nt14.33□□□□□ -0.11
VPS20Q04272 SDH1YKL148C 1923 nt14.32□□□□□ -0.12
VPS20Q04272 IRC15YPL017C 1500 nt14.31□□□□□ -0.12
VPS20Q04272 ART5YGR068C 1761 nt14.3□□□□□ -0.12
VPS20Q04272 GFD2YCL036W 1701 nt14.29□□□□□ -0.12
VPS20Q04272 GIS3YLR094C 1509 nt14.2□□□□□ -0.14
VPS20Q04272 TIR4YOR009W 1464 nt14.18□□□□□ -0.14
VPS20Q04272 SCC4YER147C 1875 nt14.18□□□□□ -0.14
VPS20Q04272 RTS2YOR077W 699 nt14.17□□□□□ -0.14
VPS20Q04272 PET9YBL030C 957 nt14.14□□□□□ -0.15
VPS20Q04272 NPL3YDR432W 1245 nt14.1□□□□□ -0.15
VPS20Q04272 YOR139CYOR139C 393 nt14.09□□□□□ -0.15
VPS20Q04272 YOL037CYOL037C 354 nt14.05□□□□□ -0.16
VPS20Q04272 YMR057CYMR057C 372 nt14.04□□□□□ -0.16
VPS20Q04272 YCH1YGR203W 447 nt14.02□□□□□ -0.17
VPS20Q04272 CUE1YMR264W 612 nt13.99□□□□□ -0.17
VPS20Q04272 YLR154C-GYLR154C-G 150 nt13.98□□□□□ -0.17
VPS20Q04272 FPS1YLL043W 2010 nt13.94□□□□□ -0.18
VPS20Q04272 YJL152WYJL152W 360 nt13.92□□□□□ -0.18
VPS20Q04272 YSC84YHR016C 1407 nt13.9□□□□□ -0.18
VPS20Q04272 PCH2YBR186W 1695 nt13.89□□□□□ -0.19
VPS20Q04272 YHL050CYHL050C 2094 nt13.86□□□□□ -0.19
VPS20Q04272 SEC11YIR022W 504 nt13.85□□□□□ -0.19
VPS20Q04272 GUT2YIL155C 1950 nt13.85□□□□□ -0.19
VPS20Q04272 RRT12YCR045C 1476 nt13.84□□□□□ -0.19
VPS20Q04272 WHI5YOR083W 888 nt13.82□□□□□ -0.2
VPS20Q04272 YLR281CYLR281C 468 nt13.81□□□□□ -0.2
VPS20Q04272 YIL100WYIL100W 354 nt13.76□□□□□ -0.21
VPS20Q04272 YCL048W-AYCL048W-A 240 nt13.73□□□□□ -0.21
VPS20Q04272 YLR236CYLR236C 324 nt13.72□□□□□ -0.21
VPS20Q04272 PIB2YGL023C 1908 nt13.71□□□□□ -0.21
VPS20Q04272 YNL195CYNL195C 786 nt13.65□□□□□ -0.22
VPS20Q04272 RRD1YIL153W 1182 nt13.56□□□□□ -0.24
VPS20Q04272 PUS2YGL063W 1113 nt13.55□□□□□ -0.24
VPS20Q04272 IDH1YNL037C 1083 nt13.55□□□□□ -0.24
VPS20Q04272 RTF1YGL244W 1677 nt13.55□□□□□ -0.24
VPS20Q04272 tM(CAU)CtM(CAU)C 72 nt13.53□□□□□ -0.24
VPS20Q04272 IMT4tM(CAU)E 72 nt13.53□□□□□ -0.24
VPS20Q04272 IMT3tM(CAU)J3 72 nt13.53□□□□□ -0.24
VPS20Q04272 IMT1tM(CAU)O1 72 nt13.53□□□□□ -0.24
VPS20Q04272 IMT2tM(CAU)P 72 nt13.53□□□□□ -0.24
VPS20Q04272 YPR011CYPR011C 981 nt13.53□□□□□ -0.24
VPS20Q04272 GBP2YCL011C 1284 nt13.53□□□□□ -0.24
VPS20Q04272 DED1YOR204W 1815 nt13.5□□□□□ -0.25
VPS20Q04272 DSK2YMR276W 1122 nt13.47□□□□□ -0.25
VPS20Q04272 NCP1YHR042W 2076 nt13.47□□□□□ -0.25
VPS20Q04272 BOP3YNL042W 1191 nt13.45□□□□□ -0.26
VPS20Q04272 FMT1YBL013W 1206 nt13.42□□□□□ -0.26
VPS20Q04272 PTK1YKL198C 1989 nt13.41□□□□□ -0.26
VPS20Q04272 IMP2'YIL154C 1041 nt13.41□□□□□ -0.26
VPS20Q04272 TCD2YKL027W 1344 nt13.39□□□□□ -0.27
VPS20Q04272 LCB1YMR296C 1677 nt13.38□□□□□ -0.27
VPS20Q04272 MXR2YCL033C 507 nt13.37□□□□□ -0.27
VPS20Q04272 PAC11YDR488C 1602 nt13.36□□□□□ -0.27
VPS20Q04272 FMP45YDL222C 930 nt13.35□□□□□ -0.27
VPS20Q04272 YDR433WYDR433W 441 nt13.34□□□□□ -0.27
VPS20Q04272 FMP52YER004W 696 nt13.33□□□□□ -0.28
VPS20Q04272 PCM1YEL058W 1674 nt13.31□□□□□ -0.28
VPS20Q04272 LPX1YOR084W 1164 nt13.3□□□□□ -0.28
VPS20Q04272 ADH2YMR303C 1047 nt13.27□□□□□ -0.29
VPS20Q04272 ERV46YAL042W 1248 nt13.26□□□□□ -0.29
VPS20Q04272 CWP1YKL096W 720 nt13.24□□□□□ -0.29
VPS20Q04272 SOR2YDL246C 1074 nt13.19□□□□□ -0.3
VPS20Q04272 SOR1YJR159W 1074 nt13.19□□□□□ -0.3
VPS20Q04272 SIM1YIL123W 1431 nt13.19□□□□□ -0.3
VPS20Q04272 YKR040CYKR040C 504 nt13.17□□□□□ -0.3
VPS20Q04272 FRD1YEL047C 1413 nt13.15□□□□□ -0.3
VPS20Q04272 SNF6YHL025W 999 nt13.15□□□□□ -0.3
VPS20Q04272 BIO4YNR057C 714 nt13.14□□□□□ -0.31
VPS20Q04272 YFL054CYFL054C 1941 nt13.11□□□□□ -0.31
VPS20Q04272 LYS4YDR234W 2082 nt13.11□□□□□ -0.31
VPS20Q04272 YCL042WYCL042W 360 nt13.1□□□□□ -0.31
VPS20Q04272 YIH1YCR059C 777 nt13.02□□□□□ -0.33
VPS20Q04272 SPT8YLR055C 1809 nt13.02□□□□□ -0.33
VPS20Q04272 YLL053CYLL053C 459 nt12.96□□□□□ -0.33
VPS20Q04272 SPP1YPL138C 1062 nt12.96□□□□□ -0.33
VPS20Q04272 RNQ1YCL028W 1218 nt12.95□□□□□ -0.34
VPS20Q04272 CRR1YLR213C 1269 nt12.91□□□□□ -0.34
VPS20Q04272 ERF2YLR246W 1080 nt12.89□□□□□ -0.35
VPS20Q04272 DIC1YLR348C 897 nt12.89□□□□□ -0.35
VPS20Q04272 ATF2YGR177C 1608 nt12.88□□□□□ -0.35
VPS20Q04272 PTH1YHR189W 573 nt12.84□□□□□ -0.35
VPS20Q04272 MIC10YCL057C-A 294 nt12.84□□□□□ -0.35
VPS20Q04272 MOT3YMR070W 1473 nt12.84□□□□□ -0.35
VPS20Q04272 SWE1YJL187C 2460 nt12.83□□□□□ -0.36
VPS20Q04272 FTR1YER145C 1215 nt12.83□□□□□ -0.36
VPS20Q04272 GAL1YBR020W 1587 nt12.8□□□□□ -0.36
VPS20Q04272 TRM5YHR070W 1500 nt12.79□□□□□ -0.36
VPS20Q04272 NVJ2YPR091C 2313 nt12.76□□□□□ -0.37
VPS20Q04272 HEM12YDR047W 1089 nt12.76□□□□□ -0.37
VPS20Q04272 SNG1YGR197C 1644 nt12.76□□□□□ -0.37
VPS20Q04272 YHR056W-AYHR056W-A 435 nt12.75□□□□□ -0.37
VPS20Q04272 YFL067WYFL067W 528 nt12.72□□□□□ -0.37
VPS20Q04272 YLR235CYLR235C 399 nt12.69□□□□□ -0.38
VPS20Q04272 DDR2YOL052C-A 186 nt12.68□□□□□ -0.38
VPS20Q04272 TIM23YNR017W 669 nt12.67□□□□□ -0.38
VPS20Q04272 YDL086C-AYDL086C-A 435 nt12.64□□□□□ -0.39
VPS20Q04272 YLR179CYLR179C 606 nt12.63□□□□□ -0.39
VPS20Q04272 ANP1YEL036C 1503 nt12.62□□□□□ -0.39
VPS20Q04272 AQY1YPR192W 918 nt12.6□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms