Protein–RNA interactions for Protein: Q04172

SHE9, Sensitive to high expression protein 9, mitochondrial, yeastyeast

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE9Q04172 ART5YGR068C 1761 nt12.46□□□□□ -0.41
SHE9Q04172 GFD2YCL036W 1701 nt12.45□□□□□ -0.42
SHE9Q04172 YFL021C-AYFL021C-A 855 nt12.45□□□□□ -0.42
SHE9Q04172 SEC11YIR022W 504 nt12.45□□□□□ -0.42
SHE9Q04172 GUT2YIL155C 1950 nt12.44□□□□□ -0.42
SHE9Q04172 PAC11YDR488C 1602 nt12.43□□□□□ -0.42
SHE9Q04172 YGR021WYGR021W 873 nt12.4□□□□□ -0.42
SHE9Q04172 RTS2YOR077W 699 nt12.4□□□□□ -0.42
SHE9Q04172 HOM6YJR139C 1080 nt12.35□□□□□ -0.43
SHE9Q04172 PET9YBL030C 957 nt12.35□□□□□ -0.43
SHE9Q04172 YSC84YHR016C 1407 nt12.35□□□□□ -0.43
SHE9Q04172 SHU1YHL006C 453 nt12.32□□□□□ -0.44
SHE9Q04172 YAL037C-BYAL037C-B 975 nt12.3□□□□□ -0.44
SHE9Q04172 YHL050CYHL050C 2094 nt12.27□□□□□ -0.45
SHE9Q04172 CUE1YMR264W 612 nt12.26□□□□□ -0.45
SHE9Q04172 PIB2YGL023C 1908 nt12.24□□□□□ -0.45
SHE9Q04172 YCH1YGR203W 447 nt12.24□□□□□ -0.45
SHE9Q04172 TIR4YOR009W 1464 nt12.24□□□□□ -0.45
SHE9Q04172 MNP1YGL068W 585 nt12.23□□□□□ -0.45
SHE9Q04172 RRT12YCR045C 1476 nt12.21□□□□□ -0.45
SHE9Q04172 YMR057CYMR057C 372 nt12.17□□□□□ -0.46
SHE9Q04172 RKM5YLR137W 1104 nt12.16□□□□□ -0.46
SHE9Q04172 RTF1YGL244W 1677 nt12.16□□□□□ -0.46
SHE9Q04172 YNL195CYNL195C 786 nt12.13□□□□□ -0.47
SHE9Q04172 YIL100WYIL100W 354 nt12.11□□□□□ -0.47
SHE9Q04172 FPS1YLL043W 2010 nt12.09□□□□□ -0.47
SHE9Q04172 BOP3YNL042W 1191 nt12.06□□□□□ -0.48
SHE9Q04172 NPL3YDR432W 1245 nt12.02□□□□□ -0.49
SHE9Q04172 YLR236CYLR236C 324 nt12.01□□□□□ -0.49
SHE9Q04172 NVJ2YPR091C 2313 nt12□□□□□ -0.49
SHE9Q04172 PTK1YKL198C 1989 nt11.98□□□□□ -0.49
SHE9Q04172 YJL152WYJL152W 360 nt11.96□□□□□ -0.49
SHE9Q04172 YLR154C-GYLR154C-G 150 nt11.92□□□□□ -0.5
SHE9Q04172 YKL097CYKL097C 411 nt11.91□□□□□ -0.5
SHE9Q04172 YCL048W-AYCL048W-A 240 nt11.9□□□□□ -0.5
SHE9Q04172 NCP1YHR042W 2076 nt11.9□□□□□ -0.51
SHE9Q04172 YOL037CYOL037C 354 nt11.78□□□□□ -0.52
SHE9Q04172 YFL054CYFL054C 1941 nt11.74□□□□□ -0.53
SHE9Q04172 LCB1YMR296C 1677 nt11.74□□□□□ -0.53
SHE9Q04172 SPT8YLR055C 1809 nt11.66□□□□□ -0.54
SHE9Q04172 RRD1YIL153W 1182 nt11.64□□□□□ -0.55
SHE9Q04172 WHI5YOR083W 888 nt11.62□□□□□ -0.55
SHE9Q04172 FMP52YER004W 696 nt11.56□□□□□ -0.56
SHE9Q04172 YLR281CYLR281C 468 nt11.56□□□□□ -0.56
SHE9Q04172 IDH1YNL037C 1083 nt11.56□□□□□ -0.56
SHE9Q04172 GBP2YCL011C 1284 nt11.56□□□□□ -0.56
SHE9Q04172 SIM1YIL123W 1431 nt11.55□□□□□ -0.56
SHE9Q04172 YOR139CYOR139C 393 nt11.55□□□□□ -0.56
SHE9Q04172 PCM1YEL058W 1674 nt11.54□□□□□ -0.56
SHE9Q04172 DED1YOR204W 1815 nt11.53□□□□□ -0.56
SHE9Q04172 NME1NME1 340 nt11.51□□□□□ -0.57
SHE9Q04172 BOR1YNL275W 1731 nt11.51□□□□□ -0.57
SHE9Q04172 TCD2YKL027W 1344 nt11.5□□□□□ -0.57
SHE9Q04172 LYS4YDR234W 2082 nt11.49□□□□□ -0.57
SHE9Q04172 FMT1YBL013W 1206 nt11.48□□□□□ -0.57
SHE9Q04172 SWE1YJL187C 2460 nt11.46□□□□□ -0.58
SHE9Q04172 ADH2YMR303C 1047 nt11.43□□□□□ -0.58
SHE9Q04172 BIO4YNR057C 714 nt11.42□□□□□ -0.58
SHE9Q04172 CWP1YKL096W 720 nt11.41□□□□□ -0.58
SHE9Q04172 SNF6YHL025W 999 nt11.4□□□□□ -0.58
SHE9Q04172 YJL225CYJL225C 5277 nt11.36□□□□□ -0.59
SHE9Q04172 IMP2'YIL154C 1041 nt11.34□□□□□ -0.59
SHE9Q04172 YDR433WYDR433W 441 nt11.32□□□□□ -0.6
SHE9Q04172 DSK2YMR276W 1122 nt11.31□□□□□ -0.6
SHE9Q04172 MXR2YCL033C 507 nt11.31□□□□□ -0.6
SHE9Q04172 HSP60YLR259C 1719 nt11.3□□□□□ -0.6
SHE9Q04172 SOR2YDL246C 1074 nt11.29□□□□□ -0.6
SHE9Q04172 PUS2YGL063W 1113 nt11.29□□□□□ -0.6
SHE9Q04172 SOR1YJR159W 1074 nt11.29□□□□□ -0.6
SHE9Q04172 ERF2YLR246W 1080 nt11.28□□□□□ -0.6
SHE9Q04172 CRR1YLR213C 1269 nt11.27□□□□□ -0.61
SHE9Q04172 FMP45YDL222C 930 nt11.26□□□□□ -0.61
SHE9Q04172 YCL042WYCL042W 360 nt11.25□□□□□ -0.61
SHE9Q04172 YIH1YCR059C 777 nt11.24□□□□□ -0.61
SHE9Q04172 YPR011CYPR011C 981 nt11.23□□□□□ -0.61
SHE9Q04172 YLL053CYLL053C 459 nt11.21□□□□□ -0.61
SHE9Q04172 YHR056W-AYHR056W-A 435 nt11.2□□□□□ -0.62
SHE9Q04172 GLK1YCL040W 1503 nt11.19□□□□□ -0.62
SHE9Q04172 RNQ1YCL028W 1218 nt11.18□□□□□ -0.62
SHE9Q04172 HEM12YDR047W 1089 nt11.17□□□□□ -0.62
SHE9Q04172 MIC10YCL057C-A 294 nt11.17□□□□□ -0.62
SHE9Q04172 ATF2YGR177C 1608 nt11.16□□□□□ -0.62
SHE9Q04172 ERV46YAL042W 1248 nt11.15□□□□□ -0.62
SHE9Q04172 FRD1YEL047C 1413 nt11.15□□□□□ -0.62
SHE9Q04172 UME6YDR207C 2511 nt11.14□□□□□ -0.63
SHE9Q04172 FUR4YBR021W 1902 nt11.14□□□□□ -0.63
SHE9Q04172 tM(CAU)CtM(CAU)C 72 nt11.14□□□□□ -0.63
SHE9Q04172 IMT4tM(CAU)E 72 nt11.14□□□□□ -0.63
SHE9Q04172 IMT3tM(CAU)J3 72 nt11.14□□□□□ -0.63
SHE9Q04172 IMT1tM(CAU)O1 72 nt11.14□□□□□ -0.63
SHE9Q04172 IMT2tM(CAU)P 72 nt11.14□□□□□ -0.63
SHE9Q04172 LPX1YOR084W 1164 nt11.14□□□□□ -0.63
SHE9Q04172 YKR040CYKR040C 504 nt11.12□□□□□ -0.63
SHE9Q04172 CCA1YER168C 1641 nt11.11□□□□□ -0.63
SHE9Q04172 SNG1YGR197C 1644 nt11.11□□□□□ -0.63
SHE9Q04172 RAX1YOR301W 1308 nt11.1□□□□□ -0.63
SHE9Q04172 YFL067WYFL067W 528 nt11.09□□□□□ -0.63
SHE9Q04172 FTR1YER145C 1215 nt11.08□□□□□ -0.64
SHE9Q04172 ALG12YNR030W 1656 nt11.08□□□□□ -0.64
SHE9Q04172 TRM5YHR070W 1500 nt11.05□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms