Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 CCT6YDR188W 1641 nt12.55□□□□□ -0.4
SUB1P54000 GUT2YIL155C 1950 nt12.54□□□□□ -0.4
SUB1P54000 SEC11YIR022W 504 nt12.52□□□□□ -0.41
SUB1P54000 LSM3YLR438C-A 270 nt12.5□□□□□ -0.41
SUB1P54000 SUF2tP(AGG)C 72 nt12.47□□□□□ -0.41
SUB1P54000 SUF10tP(AGG)N 72 nt12.47□□□□□ -0.41
SUB1P54000 ART5YGR068C 1761 nt12.46□□□□□ -0.41
SUB1P54000 PST2YDR032C 597 nt12.46□□□□□ -0.41
SUB1P54000 GFD2YCL036W 1701 nt12.45□□□□□ -0.42
SUB1P54000 RTS2YOR077W 699 nt12.44□□□□□ -0.42
SUB1P54000 YSC84YHR016C 1407 nt12.43□□□□□ -0.42
SUB1P54000 UME6YDR207C 2511 nt12.43□□□□□ -0.42
SUB1P54000 PIB2YGL023C 1908 nt12.35□□□□□ -0.43
SUB1P54000 YHL050CYHL050C 2094 nt12.34□□□□□ -0.43
SUB1P54000 YFL021C-AYFL021C-A 855 nt12.31□□□□□ -0.44
SUB1P54000 PET9YBL030C 957 nt12.31□□□□□ -0.44
SUB1P54000 RRT12YCR045C 1476 nt12.29□□□□□ -0.44
SUB1P54000 CUE1YMR264W 612 nt12.25□□□□□ -0.45
SUB1P54000 RTF1YGL244W 1677 nt12.24□□□□□ -0.45
SUB1P54000 YGR021WYGR021W 873 nt12.23□□□□□ -0.45
SUB1P54000 TIR4YOR009W 1464 nt12.21□□□□□ -0.46
SUB1P54000 HOM6YJR139C 1080 nt12.2□□□□□ -0.46
SUB1P54000 YCH1YGR203W 447 nt12.16□□□□□ -0.46
SUB1P54000 YAL037C-BYAL037C-B 975 nt12.16□□□□□ -0.46
SUB1P54000 YMR057CYMR057C 372 nt12.16□□□□□ -0.46
SUB1P54000 YNL195CYNL195C 786 nt12.14□□□□□ -0.47
SUB1P54000 YJL225CYJL225C 5277 nt12.13□□□□□ -0.47
SUB1P54000 SHU1YHL006C 453 nt12.12□□□□□ -0.47
SUB1P54000 BOP3YNL042W 1191 nt12.12□□□□□ -0.47
SUB1P54000 YIL100WYIL100W 354 nt12.11□□□□□ -0.47
SUB1P54000 MNP1YGL068W 585 nt12.09□□□□□ -0.47
SUB1P54000 PTK1YKL198C 1989 nt12.09□□□□□ -0.47
SUB1P54000 RKM5YLR137W 1104 nt12.02□□□□□ -0.49
SUB1P54000 RDN37-1RDN37-1 5354 nt11.99□□□□□ -0.49
SUB1P54000 RDN37-2RDN37-2 5354 nt11.99□□□□□ -0.49
SUB1P54000 YLR236CYLR236C 324 nt11.99□□□□□ -0.49
SUB1P54000 SSN3YPL042C 1668 nt11.95□□□□□ -0.5
SUB1P54000 NCP1YHR042W 2076 nt11.94□□□□□ -0.5
SUB1P54000 BSP1YPR171W 1731 nt11.94□□□□□ -0.5
SUB1P54000 NPL3YDR432W 1245 nt11.93□□□□□ -0.5
SUB1P54000 YJL152WYJL152W 360 nt11.9□□□□□ -0.5
SUB1P54000 YFL054CYFL054C 1941 nt11.84□□□□□ -0.51
SUB1P54000 YCL048W-AYCL048W-A 240 nt11.83□□□□□ -0.52
SUB1P54000 YLR154C-GYLR154C-G 150 nt11.81□□□□□ -0.52
SUB1P54000 LCB1YMR296C 1677 nt11.77□□□□□ -0.53
SUB1P54000 SPT8YLR055C 1809 nt11.74□□□□□ -0.53
SUB1P54000 UBX6YJL048C 1191 nt11.68□□□□□ -0.54
SUB1P54000 BOR1YNL275W 1731 nt11.68□□□□□ -0.54
SUB1P54000 YKL097CYKL097C 411 nt11.64□□□□□ -0.55
SUB1P54000 RRD1YIL153W 1182 nt11.59□□□□□ -0.55
SUB1P54000 YOL037CYOL037C 354 nt11.57□□□□□ -0.56
SUB1P54000 SIM1YIL123W 1431 nt11.55□□□□□ -0.56
SUB1P54000 SWE1YJL187C 2460 nt11.53□□□□□ -0.56
SUB1P54000 PCM1YEL058W 1674 nt11.52□□□□□ -0.57
SUB1P54000 LYS4YDR234W 2082 nt11.51□□□□□ -0.57
SUB1P54000 DED1YOR204W 1815 nt11.47□□□□□ -0.57
SUB1P54000 FMP52YER004W 696 nt11.47□□□□□ -0.57
SUB1P54000 WHI5YOR083W 888 nt11.47□□□□□ -0.57
SUB1P54000 GBP2YCL011C 1284 nt11.47□□□□□ -0.57
SUB1P54000 FMT1YBL013W 1206 nt11.44□□□□□ -0.58
SUB1P54000 IDH1YNL037C 1083 nt11.44□□□□□ -0.58
SUB1P54000 GID7YCL039W 2238 nt11.43□□□□□ -0.58
SUB1P54000 HSP60YLR259C 1719 nt11.42□□□□□ -0.58
SUB1P54000 TCD2YKL027W 1344 nt11.4□□□□□ -0.58
SUB1P54000 ADH2YMR303C 1047 nt11.4□□□□□ -0.58
SUB1P54000 BIO4YNR057C 714 nt11.4□□□□□ -0.58
SUB1P54000 MCH5YOR306C 1566 nt11.4□□□□□ -0.58
SUB1P54000 YLR281CYLR281C 468 nt11.39□□□□□ -0.59
SUB1P54000 CWP1YKL096W 720 nt11.38□□□□□ -0.59
SUB1P54000 SNF6YHL025W 999 nt11.36□□□□□ -0.59
SUB1P54000 YDR510C-AYDR510C-A 117 nt11.34□□□□□ -0.59
SUB1P54000 YOR139CYOR139C 393 nt11.32□□□□□ -0.6
SUB1P54000 GLK1YCL040W 1503 nt11.3□□□□□ -0.6
SUB1P54000 MAS1YLR163C 1389 nt11.28□□□□□ -0.6
SUB1P54000 ESBP6YNL125C 2022 nt11.28□□□□□ -0.6
SUB1P54000 CRR1YLR213C 1269 nt11.25□□□□□ -0.61
SUB1P54000 ERF2YLR246W 1080 nt11.25□□□□□ -0.61
SUB1P54000 MXR2YCL033C 507 nt11.24□□□□□ -0.61
SUB1P54000 ALG12YNR030W 1656 nt11.24□□□□□ -0.61
SUB1P54000 FUR4YBR021W 1902 nt11.23□□□□□ -0.61
SUB1P54000 YHR056W-AYHR056W-A 435 nt11.22□□□□□ -0.61
SUB1P54000 YDR433WYDR433W 441 nt11.21□□□□□ -0.61
SUB1P54000 MIC10YCL057C-A 294 nt11.19□□□□□ -0.62
SUB1P54000 YIH1YCR059C 777 nt11.18□□□□□ -0.62
SUB1P54000 YLL053CYLL053C 459 nt11.18□□□□□ -0.62
SUB1P54000 SOR2YDL246C 1074 nt11.17□□□□□ -0.62
SUB1P54000 SOR1YJR159W 1074 nt11.17□□□□□ -0.62
SUB1P54000 CCA1YER168C 1641 nt11.16□□□□□ -0.62
SUB1P54000 HEM12YDR047W 1089 nt11.15□□□□□ -0.62
SUB1P54000 YCL042WYCL042W 360 nt11.15□□□□□ -0.62
SUB1P54000 ATF2YGR177C 1608 nt11.14□□□□□ -0.63
SUB1P54000 DSK2YMR276W 1122 nt11.14□□□□□ -0.63
SUB1P54000 MCM5YLR274W 2328 nt11.13□□□□□ -0.63
SUB1P54000 FMP45YDL222C 930 nt11.13□□□□□ -0.63
SUB1P54000 IMP2'YIL154C 1041 nt11.13□□□□□ -0.63
SUB1P54000 HEM14YER014W 1620 nt11.13□□□□□ -0.63
SUB1P54000 RAX1YOR301W 1308 nt11.12□□□□□ -0.63
SUB1P54000 YPR011CYPR011C 981 nt11.12□□□□□ -0.63
SUB1P54000 RFC1YOR217W 2586 nt11.11□□□□□ -0.63
SUB1P54000 PUS2YGL063W 1113 nt11.11□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms