Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SLC6A12P48065 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
SLC6A12P48065 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SLC6A12P48065 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.87■■■□□ 2.05
SLC6A12P48065 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SLC6A12P48065 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SLC6A12P48065 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
SLC6A12P48065 ZNRF2P1-201ENST00000441407 443 ntBASIC27.83■■■□□ 2.05
SLC6A12P48065 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SLC6A12P48065 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SLC6A12P48065 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SLC6A12P48065 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.8■■■□□ 2.04
SLC6A12P48065 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SLC6A12P48065 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.8■■■□□ 2.04
SLC6A12P48065 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SLC6A12P48065 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
SLC6A12P48065 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SLC6A12P48065 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SLC6A12P48065 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.72■■■□□ 2.03
SLC6A12P48065 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SLC6A12P48065 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SLC6A12P48065 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SLC6A12P48065 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SLC6A12P48065 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.67■■■□□ 2.02
SLC6A12P48065 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SLC6A12P48065 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC6A12P48065 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SLC6A12P48065 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
SLC6A12P48065 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SLC6A12P48065 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.62■■■□□ 2.01
SLC6A12P48065 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SLC6A12P48065 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.61■■■□□ 2.01
SLC6A12P48065 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SLC6A12P48065 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SLC6A12P48065 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SLC6A12P48065 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.54■■■□□ 2
SLC6A12P48065 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SLC6A12P48065 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.53■■■□□ 2
SLC6A12P48065 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC6A12P48065 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.51■■□□□ 1.99
SLC6A12P48065 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SLC6A12P48065 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
SLC6A12P48065 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC6A12P48065 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC6A12P48065 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SLC6A12P48065 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SLC6A12P48065 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SLC6A12P48065 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SLC6A12P48065 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.42■■□□□ 1.98
SLC6A12P48065 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.4■■□□□ 1.98
SLC6A12P48065 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SLC6A12P48065 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
SLC6A12P48065 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SLC6A12P48065 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SLC6A12P48065 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SLC6A12P48065 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SLC6A12P48065 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
SLC6A12P48065 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC6A12P48065 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC6A12P48065 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.29■■□□□ 1.96
SLC6A12P48065 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.28■■□□□ 1.96
SLC6A12P48065 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC6A12P48065 DYNLL1-208ENST00000550178 581 ntBASIC27.28■■□□□ 1.96
SLC6A12P48065 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SLC6A12P48065 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SLC6A12P48065 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.26■■□□□ 1.96
SLC6A12P48065 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SLC6A12P48065 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
SLC6A12P48065 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.23■■□□□ 1.95
SLC6A12P48065 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
SLC6A12P48065 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SLC6A12P48065 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SLC6A12P48065 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
SLC6A12P48065 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC6A12P48065 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC6A12P48065 AP002365.1-201ENST00000603448 772 ntBASIC27.19■■□□□ 1.94
SLC6A12P48065 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
SLC6A12P48065 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SLC6A12P48065 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.18■■□□□ 1.94
SLC6A12P48065 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.18■■□□□ 1.94
SLC6A12P48065 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SLC6A12P48065 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.17■■□□□ 1.94
SLC6A12P48065 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC6A12P48065 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC6A12P48065 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.16■■□□□ 1.94
SLC6A12P48065 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SLC6A12P48065 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
SLC6A12P48065 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.15■■□□□ 1.94
SLC6A12P48065 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC6A12P48065 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC6A12P48065 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.13■■□□□ 1.93
SLC6A12P48065 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.13■■□□□ 1.93
SLC6A12P48065 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.13■■□□□ 1.93
SLC6A12P48065 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.12■■□□□ 1.93
SLC6A12P48065 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.12■■□□□ 1.93
SLC6A12P48065 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SLC6A12P48065 AL031258.1-201ENST00000623562 325 ntBASIC27.11■■□□□ 1.93
SLC6A12P48065 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC6A12P48065 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.1■■□□□ 1.93
SLC6A12P48065 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms