Protein–RNA interactions for Protein: P39706

SWD1, COMPASS component SWD1, yeastyeast

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWD1P39706 YFL021C-AYFL021C-A 855 nt11.76□□□□□ -0.53
SWD1P39706 SHU1YHL006C 453 nt11.76□□□□□ -0.53
SWD1P39706 GIS3YLR094C 1509 nt11.76□□□□□ -0.53
SWD1P39706 SUF2tP(AGG)C 72 nt11.75□□□□□ -0.53
SWD1P39706 SUF10tP(AGG)N 72 nt11.75□□□□□ -0.53
SWD1P39706 ART5YGR068C 1761 nt11.73□□□□□ -0.53
SWD1P39706 HOM6YJR139C 1080 nt11.73□□□□□ -0.53
SWD1P39706 GFD2YCL036W 1701 nt11.73□□□□□ -0.53
SWD1P39706 YGR021WYGR021W 873 nt11.72□□□□□ -0.53
SWD1P39706 YAL037C-BYAL037C-B 975 nt11.71□□□□□ -0.53
SWD1P39706 PCH2YBR186W 1695 nt11.67□□□□□ -0.54
SWD1P39706 GUT2YIL155C 1950 nt11.64□□□□□ -0.55
SWD1P39706 RTS2YOR077W 699 nt11.63□□□□□ -0.55
SWD1P39706 MNP1YGL068W 585 nt11.61□□□□□ -0.55
SWD1P39706 SEC11YIR022W 504 nt11.61□□□□□ -0.55
SWD1P39706 PET9YBL030C 957 nt11.6□□□□□ -0.55
SWD1P39706 YSC84YHR016C 1407 nt11.56□□□□□ -0.56
SWD1P39706 TIR4YOR009W 1464 nt11.56□□□□□ -0.56
SWD1P39706 PIB2YGL023C 1908 nt11.54□□□□□ -0.56
SWD1P39706 RDN37-1RDN37-1 5354 nt11.54□□□□□ -0.56
SWD1P39706 RDN37-2RDN37-2 5354 nt11.54□□□□□ -0.56
SWD1P39706 RKM5YLR137W 1104 nt11.54□□□□□ -0.56
SWD1P39706 YHL050CYHL050C 2094 nt11.54□□□□□ -0.56
SWD1P39706 CUE1YMR264W 612 nt11.5□□□□□ -0.57
SWD1P39706 YCH1YGR203W 447 nt11.49□□□□□ -0.57
SWD1P39706 RRT12YCR045C 1476 nt11.47□□□□□ -0.57
SWD1P39706 UME6YDR207C 2511 nt11.46□□□□□ -0.57
SWD1P39706 YMR057CYMR057C 372 nt11.46□□□□□ -0.57
SWD1P39706 NPL3YDR432W 1245 nt11.41□□□□□ -0.58
SWD1P39706 YKL097CYKL097C 411 nt11.39□□□□□ -0.59
SWD1P39706 RTF1YGL244W 1677 nt11.35□□□□□ -0.59
SWD1P39706 YIL100WYIL100W 354 nt11.31□□□□□ -0.6
SWD1P39706 YLR154C-GYLR154C-G 150 nt11.28□□□□□ -0.6
SWD1P39706 YNL195CYNL195C 786 nt11.27□□□□□ -0.61
SWD1P39706 PTK1YKL198C 1989 nt11.27□□□□□ -0.61
SWD1P39706 YLR236CYLR236C 324 nt11.25□□□□□ -0.61
SWD1P39706 YJL152WYJL152W 360 nt11.24□□□□□ -0.61
SWD1P39706 BOP3YNL042W 1191 nt11.24□□□□□ -0.61
SWD1P39706 NCP1YHR042W 2076 nt11.23□□□□□ -0.61
SWD1P39706 YOL037CYOL037C 354 nt11.18□□□□□ -0.62
SWD1P39706 RPM1RPM1 483 nt11.16□□□□□ -0.62
SWD1P39706 YCL048W-AYCL048W-A 240 nt11.16□□□□□ -0.62
SWD1P39706 YOR139CYOR139C 393 nt11.09□□□□□ -0.63
SWD1P39706 LCB1YMR296C 1677 nt11.06□□□□□ -0.64
SWD1P39706 WHI5YOR083W 888 nt11.04□□□□□ -0.64
SWD1P39706 RRD1YIL153W 1182 nt11.03□□□□□ -0.64
SWD1P39706 YLR281CYLR281C 468 nt11.02□□□□□ -0.65
SWD1P39706 DED1YOR204W 1815 nt10.96□□□□□ -0.65
SWD1P39706 YFL054CYFL054C 1941 nt10.95□□□□□ -0.66
SWD1P39706 GBP2YCL011C 1284 nt10.91□□□□□ -0.66
SWD1P39706 SPT8YLR055C 1809 nt10.91□□□□□ -0.66
SWD1P39706 FMT1YBL013W 1206 nt10.9□□□□□ -0.66
SWD1P39706 IDH1YNL037C 1083 nt10.9□□□□□ -0.66
SWD1P39706 FMP52YER004W 696 nt10.88□□□□□ -0.67
SWD1P39706 PCM1YEL058W 1674 nt10.88□□□□□ -0.67
SWD1P39706 LYS4YDR234W 2082 nt10.87□□□□□ -0.67
SWD1P39706 SIM1YIL123W 1431 nt10.83□□□□□ -0.68
SWD1P39706 TCD2YKL027W 1344 nt10.83□□□□□ -0.68
SWD1P39706 ADH2YMR303C 1047 nt10.79□□□□□ -0.68
SWD1P39706 YPR011CYPR011C 981 nt10.78□□□□□ -0.68
SWD1P39706 BIO4YNR057C 714 nt10.76□□□□□ -0.69
SWD1P39706 CWP1YKL096W 720 nt10.75□□□□□ -0.69
SWD1P39706 DSK2YMR276W 1122 nt10.75□□□□□ -0.69
SWD1P39706 PUS2YGL063W 1113 nt10.74□□□□□ -0.69
SWD1P39706 MXR2YCL033C 507 nt10.73□□□□□ -0.69
SWD1P39706 SWE1YJL187C 2460 nt10.73□□□□□ -0.69
SWD1P39706 IMP2'YIL154C 1041 nt10.72□□□□□ -0.69
SWD1P39706 FMP45YDL222C 930 nt10.71□□□□□ -0.69
SWD1P39706 SNF6YHL025W 999 nt10.71□□□□□ -0.69
SWD1P39706 SOR2YDL246C 1074 nt10.69□□□□□ -0.7
SWD1P39706 YDR433WYDR433W 441 nt10.69□□□□□ -0.7
SWD1P39706 tM(CAU)CtM(CAU)C 72 nt10.69□□□□□ -0.7
SWD1P39706 IMT4tM(CAU)E 72 nt10.69□□□□□ -0.7
SWD1P39706 IMT3tM(CAU)J3 72 nt10.69□□□□□ -0.7
SWD1P39706 IMT1tM(CAU)O1 72 nt10.69□□□□□ -0.7
SWD1P39706 IMT2tM(CAU)P 72 nt10.69□□□□□ -0.7
SWD1P39706 SOR1YJR159W 1074 nt10.69□□□□□ -0.7
SWD1P39706 MCH5YOR306C 1566 nt10.68□□□□□ -0.7
SWD1P39706 BOR1YNL275W 1731 nt10.64□□□□□ -0.71
SWD1P39706 YIH1YCR059C 777 nt10.62□□□□□ -0.71
SWD1P39706 ERV46YAL042W 1248 nt10.61□□□□□ -0.71
SWD1P39706 LPX1YOR084W 1164 nt10.61□□□□□ -0.71
SWD1P39706 CRR1YLR213C 1269 nt10.6□□□□□ -0.71
SWD1P39706 FRD1YEL047C 1413 nt10.59□□□□□ -0.71
SWD1P39706 ERF2YLR246W 1080 nt10.58□□□□□ -0.72
SWD1P39706 YCL042WYCL042W 360 nt10.58□□□□□ -0.72
SWD1P39706 YLL053CYLL053C 459 nt10.57□□□□□ -0.72
SWD1P39706 YKR040CYKR040C 504 nt10.56□□□□□ -0.72
SWD1P39706 RNQ1YCL028W 1218 nt10.55□□□□□ -0.72
SWD1P39706 ATF2YGR177C 1608 nt10.54□□□□□ -0.72
SWD1P39706 HSP60YLR259C 1719 nt10.53□□□□□ -0.72
SWD1P39706 YHR056W-AYHR056W-A 435 nt10.53□□□□□ -0.72
SWD1P39706 MIC10YCL057C-A 294 nt10.53□□□□□ -0.72
SWD1P39706 SNG1YGR197C 1644 nt10.47□□□□□ -0.73
SWD1P39706 HEM12YDR047W 1089 nt10.46□□□□□ -0.73
SWD1P39706 FTR1YER145C 1215 nt10.45□□□□□ -0.74
SWD1P39706 GAL1YBR020W 1587 nt10.43□□□□□ -0.74
SWD1P39706 TRM5YHR070W 1500 nt10.43□□□□□ -0.74
SWD1P39706 CCA1YER168C 1641 nt10.42□□□□□ -0.74
SWD1P39706 YFL067WYFL067W 528 nt10.41□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms