Protein–RNA interactions for Protein: P20433

RPB4, DNA-directed RNA polymerase II subunit RPB4, yeastyeast

Predicted RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB4P20433 NPL3YDR432W 1245 nt12.25□□□□□ -0.45
RPB4P20433 YOR139CYOR139C 393 nt12.25□□□□□ -0.45
RPB4P20433 CAC2YML102W 1407 nt12.18□□□□□ -0.46
RPB4P20433 YDL221WYDL221W 552 nt12.17□□□□□ -0.46
RPB4P20433 ART5YGR068C 1761 nt12.11□□□□□ -0.47
RPB4P20433 YCH1YGR203W 447 nt12.11□□□□□ -0.47
RPB4P20433 PET9YBL030C 957 nt12.1□□□□□ -0.47
RPB4P20433 GFD2YCL036W 1701 nt12.08□□□□□ -0.48
RPB4P20433 YLR154C-GYLR154C-G 150 nt12.06□□□□□ -0.48
RPB4P20433 YBR220CYBR220C 1683 nt12.06□□□□□ -0.48
RPB4P20433 SDH1YKL148C 1923 nt12.03□□□□□ -0.48
RPB4P20433 TIR4YOR009W 1464 nt12.03□□□□□ -0.48
RPB4P20433 IRC15YPL017C 1500 nt12.01□□□□□ -0.49
RPB4P20433 YLR281CYLR281C 468 nt12□□□□□ -0.49
RPB4P20433 YJL152WYJL152W 360 nt11.98□□□□□ -0.49
RPB4P20433 WHI5YOR083W 888 nt11.98□□□□□ -0.49
RPB4P20433 BDF1YLR399C 2061 nt11.98□□□□□ -0.49
RPB4P20433 SCC4YER147C 1875 nt11.95□□□□□ -0.5
RPB4P20433 GIS3YLR094C 1509 nt11.95□□□□□ -0.5
RPB4P20433 YMR057CYMR057C 372 nt11.93□□□□□ -0.5
RPB4P20433 RTS2YOR077W 699 nt11.92□□□□□ -0.5
RPB4P20433 CUE1YMR264W 612 nt11.87□□□□□ -0.51
RPB4P20433 TAT1YBR069C 1860 nt11.85□□□□□ -0.51
RPB4P20433 YCL048W-AYCL048W-A 240 nt11.84□□□□□ -0.51
RPB4P20433 PUS2YGL063W 1113 nt11.82□□□□□ -0.52
RPB4P20433 tM(CAU)CtM(CAU)C 72 nt11.8□□□□□ -0.52
RPB4P20433 IMT4tM(CAU)E 72 nt11.8□□□□□ -0.52
RPB4P20433 IMT3tM(CAU)J3 72 nt11.8□□□□□ -0.52
RPB4P20433 IMT1tM(CAU)O1 72 nt11.8□□□□□ -0.52
RPB4P20433 IMT2tM(CAU)P 72 nt11.8□□□□□ -0.52
RPB4P20433 IMP2'YIL154C 1041 nt11.8□□□□□ -0.52
RPB4P20433 Q0182Q0182 405 nt11.77□□□□□ -0.53
RPB4P20433 YLR236CYLR236C 324 nt11.77□□□□□ -0.53
RPB4P20433 IDH1YNL037C 1083 nt11.77□□□□□ -0.53
RPB4P20433 YIL100WYIL100W 354 nt11.76□□□□□ -0.53
RPB4P20433 DSK2YMR276W 1122 nt11.73□□□□□ -0.53
RPB4P20433 SEC11YIR022W 504 nt11.72□□□□□ -0.53
RPB4P20433 YNL195CYNL195C 786 nt11.67□□□□□ -0.54
RPB4P20433 GBP2YCL011C 1284 nt11.66□□□□□ -0.54
RPB4P20433 YSC84YHR016C 1407 nt11.64□□□□□ -0.55
RPB4P20433 PCH2YBR186W 1695 nt11.61□□□□□ -0.55
RPB4P20433 YJL225CYJL225C 5277 nt11.59□□□□□ -0.55
RPB4P20433 TCD2YKL027W 1344 nt11.58□□□□□ -0.56
RPB4P20433 YHL050CYHL050C 2094 nt11.57□□□□□ -0.56
RPB4P20433 YPR011CYPR011C 981 nt11.56□□□□□ -0.56
RPB4P20433 RRT12YCR045C 1476 nt11.55□□□□□ -0.56
RPB4P20433 YDR433WYDR433W 441 nt11.54□□□□□ -0.56
RPB4P20433 RRD1YIL153W 1182 nt11.54□□□□□ -0.56
RPB4P20433 GUT2YIL155C 1950 nt11.53□□□□□ -0.56
RPB4P20433 FMP45YDL222C 930 nt11.5□□□□□ -0.57
RPB4P20433 FMP52YER004W 696 nt11.5□□□□□ -0.57
RPB4P20433 ERV46YAL042W 1248 nt11.5□□□□□ -0.57
RPB4P20433 DED1YOR204W 1815 nt11.47□□□□□ -0.57
RPB4P20433 LPX1YOR084W 1164 nt11.44□□□□□ -0.58
RPB4P20433 YKR040CYKR040C 504 nt11.43□□□□□ -0.58
RPB4P20433 MXR2YCL033C 507 nt11.42□□□□□ -0.58
RPB4P20433 UME6YDR207C 2511 nt11.37□□□□□ -0.59
RPB4P20433 FMT1YBL013W 1206 nt11.36□□□□□ -0.59
RPB4P20433 BOP3YNL042W 1191 nt11.35□□□□□ -0.59
RPB4P20433 RTF1YGL244W 1677 nt11.35□□□□□ -0.59
RPB4P20433 SOR2YDL246C 1074 nt11.34□□□□□ -0.59
RPB4P20433 SOR1YJR159W 1074 nt11.34□□□□□ -0.59
RPB4P20433 YCL042WYCL042W 360 nt11.34□□□□□ -0.59
RPB4P20433 PCM1YEL058W 1674 nt11.33□□□□□ -0.6
RPB4P20433 RDN37-1RDN37-1 5354 nt11.32□□□□□ -0.6
RPB4P20433 RDN37-2RDN37-2 5354 nt11.32□□□□□ -0.6
RPB4P20433 RPM1RPM1 483 nt11.32□□□□□ -0.6
RPB4P20433 PIB2YGL023C 1908 nt11.32□□□□□ -0.6
RPB4P20433 CWP1YKL096W 720 nt11.31□□□□□ -0.6
RPB4P20433 MOT3YMR070W 1473 nt11.27□□□□□ -0.6
RPB4P20433 SNF6YHL025W 999 nt11.27□□□□□ -0.61
RPB4P20433 ADH2YMR303C 1047 nt11.27□□□□□ -0.61
RPB4P20433 FRD1YEL047C 1413 nt11.26□□□□□ -0.61
RPB4P20433 NCP1YHR042W 2076 nt11.24□□□□□ -0.61
RPB4P20433 LCB1YMR296C 1677 nt11.23□□□□□ -0.61
RPB4P20433 SIM1YIL123W 1431 nt11.22□□□□□ -0.61
RPB4P20433 BIO4YNR057C 714 nt11.15□□□□□ -0.62
RPB4P20433 PTK1YKL198C 1989 nt11.14□□□□□ -0.63
RPB4P20433 YIH1YCR059C 777 nt11.14□□□□□ -0.63
RPB4P20433 RNQ1YCL028W 1218 nt11.12□□□□□ -0.63
RPB4P20433 SPP1YPL138C 1062 nt11.11□□□□□ -0.63
RPB4P20433 YLR235CYLR235C 399 nt11.07□□□□□ -0.64
RPB4P20433 DIC1YLR348C 897 nt11.06□□□□□ -0.64
RPB4P20433 ERF2YLR246W 1080 nt11.05□□□□□ -0.64
RPB4P20433 YLL053CYLL053C 459 nt11.04□□□□□ -0.64
RPB4P20433 PTH1YHR189W 573 nt11.01□□□□□ -0.65
RPB4P20433 LYS4YDR234W 2082 nt11□□□□□ -0.65
RPB4P20433 FTR1YER145C 1215 nt10.97□□□□□ -0.65
RPB4P20433 CRR1YLR213C 1269 nt10.97□□□□□ -0.65
RPB4P20433 YFL054CYFL054C 1941 nt10.97□□□□□ -0.65
RPB4P20433 YFL067WYFL067W 528 nt10.94□□□□□ -0.66
RPB4P20433 YKL030WYKL030W 606 nt10.94□□□□□ -0.66
RPB4P20433 TIM23YNR017W 669 nt10.94□□□□□ -0.66
RPB4P20433 AQY1YPR192W 918 nt10.94□□□□□ -0.66
RPB4P20433 GAL1YBR020W 1587 nt10.92□□□□□ -0.66
RPB4P20433 ATF2YGR177C 1608 nt10.9□□□□□ -0.66
RPB4P20433 YLR179CYLR179C 606 nt10.89□□□□□ -0.67
RPB4P20433 DDR2YOL052C-A 186 nt10.89□□□□□ -0.67
RPB4P20433 TRM5YHR070W 1500 nt10.89□□□□□ -0.67
RPB4P20433 RTG1YOL067C 534 nt10.88□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms