Protein–RNA interactions for Protein: O13563

RPN13, 26S proteasome regulatory subunit RPN13, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN13O13563 CCT6YDR188W 1641 nt11.3□□□□□ -0.6
RPN13O13563 GFD2YCL036W 1701 nt11.28□□□□□ -0.6
RPN13O13563 PTK1YKL198C 1989 nt11.25□□□□□ -0.61
RPN13O13563 ART5YGR068C 1761 nt11.25□□□□□ -0.61
RPN13O13563 RRT12YCR045C 1476 nt11.23□□□□□ -0.61
RPN13O13563 BOP3YNL042W 1191 nt11.21□□□□□ -0.61
RPN13O13563 RTS2YOR077W 699 nt11.2□□□□□ -0.62
RPN13O13563 SUF2tP(AGG)C 72 nt11.19□□□□□ -0.62
RPN13O13563 SUF10tP(AGG)N 72 nt11.19□□□□□ -0.62
RPN13O13563 LSM3YLR438C-A 270 nt11.16□□□□□ -0.62
RPN13O13563 PET9YBL030C 957 nt11.12□□□□□ -0.63
RPN13O13563 CUE1YMR264W 612 nt11.12□□□□□ -0.63
RPN13O13563 WWM1YFL010C 636 nt11.08□□□□□ -0.64
RPN13O13563 FPS1YLL043W 2010 nt11.06□□□□□ -0.64
RPN13O13563 NCP1YHR042W 2076 nt11.06□□□□□ -0.64
RPN13O13563 YNL195CYNL195C 786 nt11.06□□□□□ -0.64
RPN13O13563 UME6YDR207C 2511 nt11.02□□□□□ -0.64
RPN13O13563 YCH1YGR203W 447 nt11□□□□□ -0.65
RPN13O13563 BOR1YNL275W 1731 nt11□□□□□ -0.65
RPN13O13563 YIL100WYIL100W 354 nt10.95□□□□□ -0.66
RPN13O13563 TIR4YOR009W 1464 nt10.93□□□□□ -0.66
RPN13O13563 YFL054CYFL054C 1941 nt10.93□□□□□ -0.66
RPN13O13563 SPT8YLR055C 1809 nt10.91□□□□□ -0.66
RPN13O13563 YFL021C-AYFL021C-A 855 nt10.9□□□□□ -0.66
RPN13O13563 YMR057CYMR057C 372 nt10.89□□□□□ -0.67
RPN13O13563 YJL225CYJL225C 5277 nt10.85□□□□□ -0.67
RPN13O13563 YLR236CYLR236C 324 nt10.82□□□□□ -0.68
RPN13O13563 YGR021WYGR021W 873 nt10.76□□□□□ -0.69
RPN13O13563 PST2YDR032C 597 nt10.75□□□□□ -0.69
RPN13O13563 LCB1YMR296C 1677 nt10.74□□□□□ -0.69
RPN13O13563 HOM6YJR139C 1080 nt10.71□□□□□ -0.69
RPN13O13563 HSP60YLR259C 1719 nt10.7□□□□□ -0.7
RPN13O13563 SWE1YJL187C 2460 nt10.67□□□□□ -0.7
RPN13O13563 Q0182Q0182 405 nt10.66□□□□□ -0.7
RPN13O13563 MCH5YOR306C 1566 nt10.65□□□□□ -0.7
RPN13O13563 ALG12YNR030W 1656 nt10.64□□□□□ -0.71
RPN13O13563 NPL3YDR432W 1245 nt10.58□□□□□ -0.72
RPN13O13563 LYS4YDR234W 2082 nt10.57□□□□□ -0.72
RPN13O13563 RKM5YLR137W 1104 nt10.55□□□□□ -0.72
RPN13O13563 YCL048W-AYCL048W-A 240 nt10.55□□□□□ -0.72
RPN13O13563 MNP1YGL068W 585 nt10.54□□□□□ -0.72
RPN13O13563 YAL037C-BYAL037C-B 975 nt10.54□□□□□ -0.72
RPN13O13563 GLK1YCL040W 1503 nt10.52□□□□□ -0.73
RPN13O13563 YJL152WYJL152W 360 nt10.49□□□□□ -0.73
RPN13O13563 SHU1YHL006C 453 nt10.47□□□□□ -0.73
RPN13O13563 YLR154C-GYLR154C-G 150 nt10.44□□□□□ -0.74
RPN13O13563 SIM1YIL123W 1431 nt10.42□□□□□ -0.74
RPN13O13563 FUR4YBR021W 1902 nt10.39□□□□□ -0.75
RPN13O13563 BIO4YNR057C 714 nt10.37□□□□□ -0.75
RPN13O13563 RRD1YIL153W 1182 nt10.36□□□□□ -0.75
RPN13O13563 PCM1YEL058W 1674 nt10.35□□□□□ -0.75
RPN13O13563 FMP52YER004W 696 nt10.32□□□□□ -0.76
RPN13O13563 RDN37-1RDN37-1 5354 nt10.32□□□□□ -0.76
RPN13O13563 RDN37-2RDN37-2 5354 nt10.32□□□□□ -0.76
RPN13O13563 DSK2YMR276W 1122 nt10.31□□□□□ -0.76
RPN13O13563 MOT3YMR070W 1473 nt10.3□□□□□ -0.76
RPN13O13563 NAR1YNL240C 1476 nt10.3□□□□□ -0.76
RPN13O13563 PRP4YPR178W 1398 nt10.28□□□□□ -0.76
RPN13O13563 AAC1YMR056C 930 nt10.27□□□□□ -0.77
RPN13O13563 YEL076C-AYEL076C-A 651 nt10.26□□□□□ -0.77
RPN13O13563 YEL076CYEL076C 651 nt10.26□□□□□ -0.77
RPN13O13563 YLR464WYLR464W 651 nt10.26□□□□□ -0.77
RPN13O13563 DPS1YLL018C 1674 nt10.25□□□□□ -0.77
RPN13O13563 DED1YOR204W 1815 nt10.23□□□□□ -0.77
RPN13O13563 YHR056W-AYHR056W-A 435 nt10.21□□□□□ -0.77
RPN13O13563 CCA1YER168C 1641 nt10.21□□□□□ -0.78
RPN13O13563 FMT1YBL013W 1206 nt10.2□□□□□ -0.78
RPN13O13563 BIO5YNR056C 1686 nt10.18□□□□□ -0.78
RPN13O13563 CRR1YLR213C 1269 nt10.18□□□□□ -0.78
RPN13O13563 ERF2YLR246W 1080 nt10.18□□□□□ -0.78
RPN13O13563 PBP1YGR178C 2169 nt10.18□□□□□ -0.78
RPN13O13563 SNF6YHL025W 999 nt10.16□□□□□ -0.78
RPN13O13563 ADH2YMR303C 1047 nt10.16□□□□□ -0.78
RPN13O13563 SNF1YDR477W 1902 nt10.15□□□□□ -0.79
RPN13O13563 CWP1YKL096W 720 nt10.12□□□□□ -0.79
RPN13O13563 RAX1YOR301W 1308 nt10.11□□□□□ -0.79
RPN13O13563 GBP2YCL011C 1284 nt10.11□□□□□ -0.79
RPN13O13563 TCD2YKL027W 1344 nt10.1□□□□□ -0.79
RPN13O13563 MIC10YCL057C-A 294 nt10.1□□□□□ -0.79
RPN13O13563 YKR005CYKR005C 1578 nt10.09□□□□□ -0.79
RPN13O13563 HEM12YDR047W 1089 nt10.08□□□□□ -0.8
RPN13O13563 CYT2YKL087C 675 nt10.08□□□□□ -0.8
RPN13O13563 BMT6YLR063W 1098 nt10.08□□□□□ -0.8
RPN13O13563 IDH1YNL037C 1083 nt10.07□□□□□ -0.8
RPN13O13563 YOL037CYOL037C 354 nt10.05□□□□□ -0.8
RPN13O13563 ATF2YGR177C 1608 nt10.04□□□□□ -0.8
RPN13O13563 YIH1YCR059C 777 nt10.03□□□□□ -0.8
RPN13O13563 SNG1YGR197C 1644 nt10.03□□□□□ -0.8
RPN13O13563 YLL053CYLL053C 459 nt10.01□□□□□ -0.81
RPN13O13563 WSC2YNL283C 1512 nt10□□□□□ -0.81
RPN13O13563 HSL7YBR133C 2484 nt9.99□□□□□ -0.81
RPN13O13563 WHI5YOR083W 888 nt9.99□□□□□ -0.81
RPN13O13563 CMP2YML057W 1815 nt9.98□□□□□ -0.81
RPN13O13563 SOR2YDL246C 1074 nt9.97□□□□□ -0.81
RPN13O13563 SOR1YJR159W 1074 nt9.97□□□□□ -0.81
RPN13O13563 IRC24YIR036C 792 nt9.95□□□□□ -0.82
RPN13O13563 RNQ1YCL028W 1218 nt9.95□□□□□ -0.82
RPN13O13563 YFL067WYFL067W 528 nt9.94□□□□□ -0.82
RPN13O13563 YGR259CYGR259C 441 nt9.94□□□□□ -0.82
RPN13O13563 AGP1YCL025C 1902 nt9.92□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms