Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV6-4A0A1B0GX49 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRBV6-4A0A1B0GX49 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRBV6-4A0A1B0GX49 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV6-4A0A1B0GX49 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV6-4A0A1B0GX49 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV6-4A0A1B0GX49 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV6-4A0A1B0GX49 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
TRBV6-4A0A1B0GX49 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV6-4A0A1B0GX49 AC006077.2-201ENST00000623591 457 ntBASIC20.2■□□□□ 0.82
TRBV6-4A0A1B0GX49 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-4A0A1B0GX49 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRBV6-4A0A1B0GX49 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV6-4A0A1B0GX49 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
TRBV6-4A0A1B0GX49 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV6-4A0A1B0GX49 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV6-4A0A1B0GX49 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV6-4A0A1B0GX49 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV6-4A0A1B0GX49 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-4A0A1B0GX49 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV6-4A0A1B0GX49 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.1■□□□□ 0.81
TRBV6-4A0A1B0GX49 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-4A0A1B0GX49 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.09■□□□□ 0.81
TRBV6-4A0A1B0GX49 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRBV6-4A0A1B0GX49 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRBV6-4A0A1B0GX49 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-4A0A1B0GX49 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV6-4A0A1B0GX49 ZNRF2P1-201ENST00000441407 443 ntBASIC20.03■□□□□ 0.8
TRBV6-4A0A1B0GX49 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-4A0A1B0GX49 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-4A0A1B0GX49 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-4A0A1B0GX49 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-4A0A1B0GX49 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-4A0A1B0GX49 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-4A0A1B0GX49 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-4A0A1B0GX49 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-4A0A1B0GX49 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-4A0A1B0GX49 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-4A0A1B0GX49 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV6-4A0A1B0GX49 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-4A0A1B0GX49 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-4A0A1B0GX49 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-4A0A1B0GX49 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-4A0A1B0GX49 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.91■□□□□ 0.78
TRBV6-4A0A1B0GX49 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-4A0A1B0GX49 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.9■□□□□ 0.78
TRBV6-4A0A1B0GX49 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV6-4A0A1B0GX49 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.89■□□□□ 0.77
TRBV6-4A0A1B0GX49 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.88■□□□□ 0.77
TRBV6-4A0A1B0GX49 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-4A0A1B0GX49 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-4A0A1B0GX49 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.86■□□□□ 0.77
TRBV6-4A0A1B0GX49 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
TRBV6-4A0A1B0GX49 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV6-4A0A1B0GX49 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV6-4A0A1B0GX49 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV6-4A0A1B0GX49 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-4A0A1B0GX49 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TRBV6-4A0A1B0GX49 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-4A0A1B0GX49 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-4A0A1B0GX49 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV6-4A0A1B0GX49 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV6-4A0A1B0GX49 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRBV6-4A0A1B0GX49 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.77■□□□□ 0.76
TRBV6-4A0A1B0GX49 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRBV6-4A0A1B0GX49 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.77■□□□□ 0.76
TRBV6-4A0A1B0GX49 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV6-4A0A1B0GX49 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV6-4A0A1B0GX49 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV6-4A0A1B0GX49 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.76■□□□□ 0.75
TRBV6-4A0A1B0GX49 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV6-4A0A1B0GX49 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-4A0A1B0GX49 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-4A0A1B0GX49 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV6-4A0A1B0GX49 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRBV6-4A0A1B0GX49 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-4A0A1B0GX49 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.73■□□□□ 0.75
TRBV6-4A0A1B0GX49 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-4A0A1B0GX49 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-4A0A1B0GX49 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-4A0A1B0GX49 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRBV6-4A0A1B0GX49 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV6-4A0A1B0GX49 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV6-4A0A1B0GX49 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV6-4A0A1B0GX49 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-4A0A1B0GX49 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRBV6-4A0A1B0GX49 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-4A0A1B0GX49 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV6-4A0A1B0GX49 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-4A0A1B0GX49 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV6-4A0A1B0GX49 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRBV6-4A0A1B0GX49 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
TRBV6-4A0A1B0GX49 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV6-4A0A1B0GX49 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-4A0A1B0GX49 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRBV6-4A0A1B0GX49 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-4A0A1B0GX49 DYNLL1-208ENST00000550178 581 ntBASIC19.62■□□□□ 0.73
TRBV6-4A0A1B0GX49 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-4A0A1B0GX49 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-4A0A1B0GX49 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms