Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 AL512652.2-201ENST00000625156 1716 ntBASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 AL591424.1-201ENST00000442569 1213 ntBASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 NORAD-201ENST00000565493 5339 ntBASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 SNX33P1-201ENST00000592116 1762 ntBASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 LINC01101-201ENST00000622953 1884 ntBASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HHLA3Q9XRX5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.75□□□□□ -0.53
HHLA3Q9XRX5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms