Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 LINC00304-203ENST00000565008 1864 ntBASIC6.33□□□□□ -1.4
MACF1Q9UPN3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 HNRNPA1P59-201ENST00000430583 918 ntBASIC6.33□□□□□ -1.4
MACF1Q9UPN3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 AC009517.1-201ENST00000454750 570 ntBASIC6.33□□□□□ -1.4
MACF1Q9UPN3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 OR2A1-AS1-210ENST00000496968 531 ntBASIC6.33□□□□□ -1.4
MACF1Q9UPN3 POU5F1P2-201ENST00000521750 823 ntBASIC6.33□□□□□ -1.4
MACF1Q9UPN3 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 AC009955.4-201ENST00000597192 544 ntBASIC6.33□□□□□ -1.4
MACF1Q9UPN3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MACF1Q9UPN3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 CCNL2P1-201ENST00000512846 969 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AC006483.2-201ENST00000609813 515 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 PPIA-210ENST00000620047 827 ntTSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AC091905.3-201ENST00000624959 234 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 LINC01815-202ENST00000641468 1409 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 POLR2LP1-206ENST00000444785 187 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 PUDPP3-201ENST00000445368 636 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 PHKG1P2-201ENST00000457537 863 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 NEK4P3-201ENST00000604859 544 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AL008638.4-201ENST00000624792 1315 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 MIR193A-201ENST00000384882 88 ntBASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MACF1Q9UPN3 AC114812.1-204ENST00000449669 728 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms