Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 TNRC18P2-201ENST00000417666 2714 ntBASIC14.17□□□□□ -0.14
DUX4Q9UBX2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.17□□□□□ -0.14
DUX4Q9UBX2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 MIR940-201ENST00000401276 94 ntBASIC14.16□□□□□ -0.14
DUX4Q9UBX2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 AC107918.2-201ENST00000530817 355 ntBASIC14.16□□□□□ -0.14
DUX4Q9UBX2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DUX4Q9UBX2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 AP002414.2-201ENST00000591780 3365 ntBASIC14.15□□□□□ -0.14
DUX4Q9UBX2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.15□□□□□ -0.14
DUX4Q9UBX2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 KRT18P2-201ENST00000447938 1258 ntBASIC14.15□□□□□ -0.14
DUX4Q9UBX2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 GGTLC5P-201ENST00000617623 998 ntBASIC14.15□□□□□ -0.14
DUX4Q9UBX2 REXO1L3P-201ENST00000622202 1288 ntBASIC14.15□□□□□ -0.14
DUX4Q9UBX2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 AC092364.2-201ENST00000596710 2692 ntBASIC14.15□□□□□ -0.14
DUX4Q9UBX2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX4Q9UBX2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.15□□□□□ -0.15
DUX4Q9UBX2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.15□□□□□ -0.15
DUX4Q9UBX2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
DUX4Q9UBX2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.14□□□□□ -0.15
DUX4Q9UBX2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX4Q9UBX2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX4Q9UBX2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DUX4Q9UBX2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms