Protein–RNA interactions for Protein: Q9NS71

GKN1, Gastrokine-1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1Q9NS71 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CDC14C-201ENST00000428251 1719 ntBASIC16.51■□□□□ 0.23
GKN1Q9NS71 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 MIR658-201ENST00000385210 100 ntBASIC16.51■□□□□ 0.23
GKN1Q9NS71 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 MIR1909-201ENST00000411312 80 ntBASIC16.51■□□□□ 0.23
GKN1Q9NS71 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 AL033527.5-201ENST00000641382 801 ntBASIC16.51■□□□□ 0.23
GKN1Q9NS71 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.51■□□□□ 0.23
GKN1Q9NS71 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GKN1Q9NS71 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 LINC02199-201ENST00000506655 2702 ntBASIC16.5■□□□□ 0.23
GKN1Q9NS71 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 KRT18P64-201ENST00000434946 1219 ntBASIC16.5■□□□□ 0.23
GKN1Q9NS71 RPL13P2-201ENST00000440687 659 ntBASIC16.5■□□□□ 0.23
GKN1Q9NS71 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.5■□□□□ 0.23
GKN1Q9NS71 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GKN1Q9NS71 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.49■□□□□ 0.23
GKN1Q9NS71 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.49■□□□□ 0.23
GKN1Q9NS71 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GKN1Q9NS71 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.49■□□□□ 0.23
GKN1Q9NS71 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms