Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 GPX1P2-201ENST00000429271 606 ntBASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 RHOQP3-201ENST00000437982 621 ntBASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 UNC93B7-201ENST00000509439 705 ntBASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 UNC93B6-202ENST00000528242 690 ntBASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 AC012313.10-201ENST00000623509 926 ntBASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CDC42SE2Q9NRR3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 AC140658.5-201ENST00000438532 169 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 HCG4B-203ENST00000450128 991 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 EMBP1-201ENST00000458200 901 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 PRYP6-201ENST00000514804 343 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 AC023141.13-201ENST00000604991 943 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 AC148477.8-201ENST00000624298 468 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 FAM45BP-202ENST00000592932 1624 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.04□□□□□ -0.64
CDC42SE2Q9NRR3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms