Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTN4Q9NQC3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 AC004899.2-201ENST00000622993 3860 ntBASIC19.05■□□□□ 0.64
RTN4Q9NQC3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 AC112907.2-201ENST00000448639 330 ntBASIC19.05■□□□□ 0.64
RTN4Q9NQC3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 PGGT1BP1-201ENST00000455321 1023 ntBASIC19.05■□□□□ 0.64
RTN4Q9NQC3 AC117500.1-201ENST00000497352 755 ntBASIC19.05■□□□□ 0.64
RTN4Q9NQC3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 AC005363.2-201ENST00000618631 242 ntBASIC19.05■□□□□ 0.64
RTN4Q9NQC3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 AC097493.4-201ENST00000641197 219 ntBASIC19.05■□□□□ 0.64
RTN4Q9NQC3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC19.05■□□□□ 0.64
RTN4Q9NQC3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 SPDYE13P-201ENST00000445314 798 ntBASIC19.04■□□□□ 0.64
RTN4Q9NQC3 HOMER2P1-201ENST00000455653 964 ntBASIC19.04■□□□□ 0.64
RTN4Q9NQC3 AC007688.1-201ENST00000475592 759 ntBASIC19.04■□□□□ 0.64
RTN4Q9NQC3 IGHV3-52-201ENST00000519770 353 ntBASIC19.04■□□□□ 0.64
RTN4Q9NQC3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 AC124947.2-201ENST00000547118 1133 ntBASIC19.04■□□□□ 0.64
RTN4Q9NQC3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 SLC9A3P3-201ENST00000457608 2229 ntBASIC19.04■□□□□ 0.64
RTN4Q9NQC3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.04■□□□□ 0.64
RTN4Q9NQC3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 AL049757.1-201ENST00000616842 1596 ntBASIC19.03■□□□□ 0.64
RTN4Q9NQC3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RTN4Q9NQC3 RNF152P1-201ENST00000397754 604 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms