Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 AC023511.2-201ENST00000618803 211 ntBASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 FOXO1B-201ENST00000504678 1527 ntBASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRTM1Q9HBL6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 AL355306.1-201ENST00000415580 579 ntBASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 SLC25A1P1-201ENST00000528351 927 ntBASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 AL691432.1-201ENST00000596308 1422 ntBASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRTM1Q9HBL6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TFAMP1-201ENST00000412727 736 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AL671277.1-201ENST00000429656 993 ntBASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.4■□□□□ 0.06
LRTM1Q9HBL6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms