Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.09□□□□□ -0.15
SLIRPQ9GZT3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.08□□□□□ -0.15
SLIRPQ9GZT3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 TP73-AS1-210ENST00000637775 1455 ntBASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 KRT18P22-201ENST00000402024 1347 ntBASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 AL122018.1-201ENST00000446607 2310 ntBASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLIRPQ9GZT3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 AP001282.1-201ENST00000531301 1499 ntBASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 AC142381.4-202ENST00000563973 229 ntBASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLIRPQ9GZT3 AC011474.4-201ENST00000623523 2076 ntBASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms