Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LCE3DQ9BYE3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 API5-202ENST00000420461 2009 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AC145098.2-201ENST00000623593 3026 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 INGX-201ENST00000359239 846 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MIR662-201ENST00000384847 95 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NAPSB-206ENST00000562112 1266 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MIR4785-201ENST00000585005 73 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AP001542.1-201ENST00000591314 200 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AC020765.3-201ENST00000613051 740 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AL590326.2-201ENST00000625139 305 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 PGM5P2-202ENST00000637225 1043 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 TOP3BP1-201ENST00000420768 1380 ntBASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LCE3DQ9BYE3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms